AMCG00019006


Basic Information

Item Value
gene id AMCG00019006
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 594775 ~ 609647 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019006
tgagtgtgtgtctcagtatgtgtgtgtgtgtgtgtgtgtcagagttaGAAAGTGTGAGtgtaggtctgtgtgtgtcGCTGTTTCATATTCTCTGTCTCTGATCTGTTCCTGAGCTTCTGGAAGGACTCCTCGTCATCAGGTCAGGGGaaaggggtcagaggtcactgaGAGATGGCCACCAAGGGAAAAGTGCTGACCCTGACAGAGGTCAACCCCATGGTCAGGTGCATACCCACCTCGAAGACGGACATTCTGGTCAGACGAGCTGGAGAGATCACGAGAGAGCTGGagcagGGGGCGGTGAAGCCCTTTCCAGATGTAATCATAGTCAGCTCTGGAGACAGCCATGGGGCTGGCATGCAGCCCATCACCTTCGTTCGCCAGGTAATGGCAGCCTGTCTGTACCCAGAGCTACTCCACAGTGACCGGCTGCCCTCTGACGTCAGGCAGAGAgcccagaggctgctgggagagTGTGAGGGAAGCAGTGTTGGGTCCTATTCTTGCCCCTTGGGGCTGGATGCGGTGCGGCGCAGTGTGGCTGAGTCCCTCCAGCGGCGGGACGGGGGGGTGATCTCTGATTCCGACAACATCTTCATCCAGTCAGGCTCCCATGTCGCCCTCAtgCGGGTTTTGAAGGTGCTGCTCCATGGTGAGGGCGTCTCTCAGACAGGGGTGCTGGTGCCCGTGCCCTGCCACCCCCGCTTCACCCAGGCAGTGTGGGCGCTGGGGGGGGTGCCGCTGCCCTTCCAGCTCTCGGAGGAGCGGGGCTGGGTGCTGGAGCGGGAGGAGCTGCAAAGAGCCCTCCGAGACGCCAGGGGGCGCTGCAGCCCCAGAGCACTGTACTTCGTCAACCCAGGGAACCCCACAGGTCACGTGCAGAGCAGGGAGTCCATTGAAGAGGTGATCCGACTCGCTGCTGAGGAGAGCCTGTTCCTGCTGGTGGACGAGgtgtATCAGCAGACAGTGTTCGGTGTGGACAGAGAGTTTGACTCCTATAAGAAGGTGCTGTGTGAGATGGGCCCCCCGTACTCCAGCACTGTGCAGCTGGCCTCCGTCCACTCGGTGTCCAAGGGCTTCATGGGAGAGAGTGGGCTGCGCTGTGGCTACGTGGAGTTCATGAACCTTGACCCCCAAGTGAAGAAGCACATCTCCAGTATAGTGGCCAAAGAGGGCTGTGCTCCCATCATCGGCCAGATCGCCCTGGACATCATGGCTGCCCCCCCGCAACCCGGGGACGCCTCCTACACCACCTTCAGAGCGGAGCACCAGGCCAGTTTGGACACGCTGGCCCACAATGTCCGCAGAGTGCAAGAGACAGCGGACGGCCTCCCCGGGGTCAGCTATCAGCCCCCCCAGGGCGGCATCACAATCTTCCTCCGACTGCACCTCTCCCACCGAGCCGTGGAACAGGCCAAGGCGCTGGGGCTGGAGCCTGACCTGTTCTACTGCATGCggctgctggaggaggagggagtGTGTGCAGGACCTGGCTGTGACCTGGGCCAGAGGGAGGGCACCTACCACCTCAGGCTGTGCATCCTGATGCCCACAGACTCCCTGGAGGAAATGCTGAGACGCCTGAAGAGTTTCCATCACAGATTCATGCAGGACTTCTGCtaaccagacacacacacacatgcacatactcAGGGAGACAGGCAGGCACACCCGCACACAAACTgaccagaataaatacattatatccAATCAAACACTGAGTCTGATCGAGTGATTGATCTTGATAAATCTCAAATTGATGATATTAGCACTATGAGAATTGCATAACATTGTGACTTGTGCAGGTGATTGTGCGCAGTTAGCCAACGCAGGAACGAGGAAGAAGTGGAAGTGACatggagagagtgtgtttgATTTGACCGGTCCTGTCAAGCTTATTTTTCCATCTTATTATGTAGCTTTactcctgtctgtgtgtctgtcactgTAATACAGCTTTACTTCTTTGTGTTGTATATCGGGGCTGGCCAGGTATGTACCTTGGGAGTTTCCATAGTTTCATCGCTAAGGATGATGGGGCATCACTGTTAGTAGTTAGTTAAGCACTTCCTGGTGAAACGTGTAATGCAGACTTATCCAGTTAATAAAAGTACTTGTGAGTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019006 True 2125 mRNA 0.56 12 594775 609647

Neighbor

gene id symbol gene type direction distance location
AMCG00019002 foxh1,LOC108431400,LOC106590409 coding downstream 60382 525755 ~ 534393 (-)
AMCG00019001 gpaa1 coding downstream 75928 514803 ~ 518847 (-)
AMCG00019003 maf1 coding downstream 97938 478027 ~ 496837 (-)
AMCG00018994 NA coding downstream 176509 416156 ~ 418266 (-)
AMCG00018993 NA coding downstream 183018 405369 ~ 411757 (-)
AMCG00019010 NA coding upstream 59736 669383 ~ 670387 (-)
AMCG00019015 NA coding upstream 103223 712870 ~ 723666 (-)
AMCG00019014 NA coding upstream 118418 728065 ~ 737692 (-)
AMCG00019018 rhpn1,LOC106584065 coding upstream 374898 984545 ~ 992405 (-)
AMCG00019019 NA coding upstream 392946 1002593 ~ 1012013 (-)
G30760 NA non-coding downstream 70779 522119 ~ 523996 (-)
G30612 NA non-coding downstream 180493 413888 ~ 414282 (-)
G30594 sspo non-coding downstream 326848 266073 ~ 267927 (-)
G30593 NA non-coding downstream 334710 259434 ~ 260065 (-)
G30539 NA non-coding downstream 520625 73888 ~ 74150 (-)
G30784 NA non-coding upstream 103065 712712 ~ 733413 (-)
G30797 NA non-coding upstream 224811 834458 ~ 839109 (-)
G30809 NA non-coding upstream 278002 887649 ~ 894190 (-)
G30823 NA non-coding upstream 441438 1051085 ~ 1053885 (-)
G30871 NA non-coding upstream 617183 1226830 ~ 1232565 (-)
G30729 NA other downstream 94586 498732 ~ 500189 (-)
AMCG00018991 NA other downstream 117679 473449 ~ 477096 (-)
AMCG00018992 NA other downstream 140011 452955 ~ 454764 (-)
AMCG00018988 NA other downstream 257142 225374 ~ 337633 (-)
AMCG00018975 kcnh2b,kcnh2,LOC107713341,LOC106590277 other downstream 440250 144253 ~ 154525 (-)
AMCG00019007 LOC106613553,LOC108443229 other upstream 4751 614398 ~ 634293 (-)
G30849 NA other upstream 564877 1174524 ~ 1174983 (-)
AMCG00019024 NA other upstream 565384 1175031 ~ 1177566 (-)
AMCG00019031 LOC107567020,LOC106939174 other upstream 630064 1239711 ~ 1260637 (-)
AMCG00019034 NA other upstream 711967 1321614 ~ 1323596 (-)

Expression


Co-expression Network