AMCG00019008


Basic Information

Item Value
gene id AMCG00019008
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 608775 ~ 623347 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019008
ATGGTGTACAGCAGGGGGCAGAGTTACCTGGCGAACGAAGCTCGTCTGACCAGAATGTCCGTCTTCGAGGTGGGTATGCACCTGACCATGGGGTTGACCTCTGTCAGGAGTGACAGTCAGCTTGACTGGCACCTTCACATCCACCTCCTTCCTCACCACGTTCACAGTGAGCTTGGTGTGAGGAGGGACTTTGGCTGGCAGGCTGACCTGGACCTTCTTCCTCTCGGTCTTGGTGTTGCTGCTTCCCTTTTCCACGGTGAAGGTGTTGCTCACAGAAACGCTGAATTCGTTCTTCACCTTGAACACGTCTACGGAGAAAGTCGATCCCACAGTTATCTGAGTCGAGTTGCTGAAGTTGAAGGTCTCAGTGACCGAGCCCTCGTACTCTCGGCTCAGCTCTGTGGAGAAGCTCTGCTCGTGGTCACCATGGTTCAGGCCACACAAGGAGTCGATGGTGATGGACTTCATCTGCTCTTCCTTCTTGTCCCACAGGACCTCAGCTGTCACTGTCGGCTTCCCTGGCTTCAGAGGGCGCAGGTGGGACAGACGATCATTGAACCAACCATAATCAGGCACGTCATGACCAGCTCTGGCCACCATCTGCACCCCTCCTCTGTCTATGTGTTCGTACAGGACCCAGGCTCCTCTCTGCACTCTGTGGGAGGATGCCACATCATTGAAGGAGCCGTGGCACAGGTTGGTCTCGCAGCCATCTCCACACCACCCTGCTGCATCTGGCACTGGGCTGGACTGGGTTGTTCTGTCCtgtgcagtgttgtgctgtgctgtgatgaCCTCTCCTcttctgtcctgtcctgtcctgttcCGGGCTGGAGTGCAGTGGGTGTGCTGGGCTTTCCTGGGGGTAGAAGAGTGTTCATGAGTTTCAGCTACATCAGAGAGTCGCAGGGCAGATGTACCGTCCCACAGCCGCTGTCTCAGTGCGGGAGGGAGGGCTGGCTGGTCCCTGGGATGCATGCAGTCCCTGCGCGCAGGCCGGTCGTGCCCTCGGGGCAGCTGCACTTGTTGAAGGGGCTGCAGGTGGCACCATGTTGGCAGGGGGGTACACAGGGTGCAGTCACCGCTGTGGAGATGAGCAGGGGCATGGCATTAATCCAGGGGGTGCTGGGAGTGGGGCGGGTGGTCAGAGGGGAGGTGCTGGTGCAGTGCTGCCCCCTGGAGGGCAGAGCGGGTACTCACGGATCAGGCACTGGGGACCGCTGTAGTCTGAAGGACACTGGCATAGATCCGGGGCAGTGCAGCGCCCCCCATTGGCACAGGGCAGCTCACACACCGCTGGAGGAAGACAGagtcagagacagagagcagaaggaCAAAAATGCAGTCAGAGAGGCAGGAGAGCAGGGGACAGTGCAgtcagagagacaggagagcaGGGGACAGTGCAGTCAGAGAGACAGGGGACAGTGcagtcagagagacagaggacagTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019008 True 1455 mRNA 0.59 6 608775 623347

Neighbor

gene id symbol gene type direction distance location
AMCG00019005 NA coding upstream 9577 597828 ~ 599198 (+)
AMCG00019004 gpt,LOC103482433 coding upstream 22512 575957 ~ 586263 (+)
AMCG00018997 NA coding upstream 48178 559335 ~ 560597 (+)
AMCG00019000 NA coding upstream 94344 506635 ~ 514431 (+)
AMCG00018998 exosc4,exos4 coding upstream 105344 498649 ~ 503431 (+)
AMCG00019009 NA coding downstream 77977 701324 ~ 702246 (+)
AMCG00019011 NA coding downstream 120807 744154 ~ 751040 (+)
AMCG00019013 NA coding downstream 157046 780393 ~ 780629 (+)
AMCG00019017 NA coding downstream 214652 837999 ~ 847327 (+)
AMCG00019016 mafa,LOC107704507 coding downstream 237136 860483 ~ 861397 (+)
G30619 NA non-coding upstream 112255 443168 ~ 496520 (+)
G30583 NA non-coding upstream 236977 370446 ~ 371798 (+)
G30549 NA non-coding upstream 326631 227976 ~ 282144 (+)
G30699 NA non-coding downstream 385914 1009261 ~ 1026744 (+)
G30700 NA non-coding downstream 389664 1013011 ~ 1053885 (+)
G30723 NA non-coding downstream 515158 1138505 ~ 1139858 (+)
G30857 NA non-coding downstream 563050 1186397 ~ 1187225 (+)
G30866 NA non-coding downstream 572585 1195932 ~ 1196202 (+)
AMCG00018999 NA other upstream 51871 549516 ~ 556904 (+)
G30589 NA other upstream 210103 395501 ~ 398672 (+)
G30527 NA other upstream 534544 73792 ~ 74231 (+)
AMCG00019012 NA other downstream 115879 739226 ~ 744083 (+)
G30698 NA other downstream 371980 995327 ~ 1001213 (+)
AMCG00019029 NA other downstream 574639 1197986 ~ 1199095 (+)
AMCG00019030 NA other downstream 590329 1213676 ~ 1237637 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other downstream 630019 1253366 ~ 1253735 (+)

Expression


Co-expression Network