Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019017 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 837999 ~ 847327 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019017 | True | 531 | mRNA | 0.69 | 4 | 837999 | 847327 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019013 | NA | coding | upstream | 57370 | 780393 ~ 780629 (+) |
| AMCG00019011 | NA | coding | upstream | 86959 | 744154 ~ 751040 (+) |
| AMCG00019009 | NA | coding | upstream | 135753 | 701324 ~ 702246 (+) |
| AMCG00019008 | NA | coding | upstream | 214652 | 608775 ~ 623347 (+) |
| AMCG00019005 | NA | coding | upstream | 238801 | 597828 ~ 599198 (+) |
| AMCG00019016 | mafa,LOC107704507 | coding | downstream | 13156 | 860483 ~ 861397 (+) |
| AMCG00019021 | NA | coding | downstream | 250902 | 1098229 ~ 1114219 (+) |
| AMCG00019020 | NA | coding | downstream | 330793 | 1178120 ~ 1183904 (+) |
| AMCG00019040 | NA | coding | downstream | 567283 | 1414610 ~ 1428982 (+) |
| AMCG00019041 | NA | coding | downstream | 706746 | 1554073 ~ 1557865 (+) |
| G30619 | NA | non-coding | upstream | 341479 | 443168 ~ 496520 (+) |
| G30583 | NA | non-coding | upstream | 466201 | 370446 ~ 371798 (+) |
| G30549 | NA | non-coding | upstream | 555855 | 227976 ~ 282144 (+) |
| G30699 | NA | non-coding | downstream | 161934 | 1009261 ~ 1026744 (+) |
| G30700 | NA | non-coding | downstream | 165684 | 1013011 ~ 1053885 (+) |
| G30723 | NA | non-coding | downstream | 291178 | 1138505 ~ 1139858 (+) |
| G30857 | NA | non-coding | downstream | 339070 | 1186397 ~ 1187225 (+) |
| G30866 | NA | non-coding | downstream | 348605 | 1195932 ~ 1196202 (+) |
| AMCG00019012 | NA | other | upstream | 93916 | 739226 ~ 744083 (+) |
| AMCG00018999 | NA | other | upstream | 281095 | 549516 ~ 556904 (+) |
| G30589 | NA | other | upstream | 439327 | 395501 ~ 398672 (+) |
| G30527 | NA | other | upstream | 763768 | 73792 ~ 74231 (+) |
| G30698 | NA | other | downstream | 148000 | 995327 ~ 1001213 (+) |
| AMCG00019029 | NA | other | downstream | 350659 | 1197986 ~ 1199095 (+) |
| AMCG00019030 | NA | other | downstream | 366349 | 1213676 ~ 1237637 (+) |
| G30877 | arhgap39,LOC106560380,LOC106584197 | other | downstream | 406039 | 1253366 ~ 1253735 (+) |
| AMCG00019033 | NA | other | downstream | 471295 | 1318622 ~ 1321493 (+) |
