AMCG00019020


Basic Information

Item Value
gene id AMCG00019020
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1178120 ~ 1183904 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019020
GCGGGACCAGCAACAAAGAGCCCTGTGCCTGCGAGCATCTGCAACAAAGAGCCCTGTGCCTGCGAGCATCTGCCCGGTCACGTCCGACACACAGACTCCCGGAGAGCTGAGCGCTGCTGGGACAGAACCGCAGGCATCCGGGTCACAAGCTGTGCATGatgACTGCAGCAGTTGGCAGGATGCTGGCGCGGGGGCTGTTAGTCTGGGTGGTGTGTGTGCAGGTCTGCTCCGTGGGGGCATTTTTCGGGTGGTTGAAGAAGCAGCCGCCCTCCCCCAGCCCGGACCCCCCAGGCTCACCGTCGGGGGGGGTTCTGCAGCCTGTCCCGCCCTTCGAGATGAACACTGTGGACGAGCGCTTCCTGGCAGAGGCCAAGCAGCTGGAGCTCAGCCCCCTGGACAGCTGCCACTACAGGGTGATCGCCCAGCTCAAGTCCACCTGCAGCAGCCTGTCGGAGGAGGAGCTGGCCAAACTGGGCGTGCTCTTGTTCAACTGCCAGGCCGAGGCGGAAGGCCGTGGGACCTACCCTTGCACCGAGGAAATGTCTATAAAGCAGTGCACGGAGGAGATGGACCCGGACACGTGGAATGCGTACCACATCGTGAGCAACAGAGCACGCTCAGTCTGCTATGCCACGCGCCAGCAACACTTCCGCAGGAGAGCAGAGATCACCGTCAACTCCCTGATCTCCACAGCAACCAGCCAGCTGGAGGCCATGAGCTCCCTGAAGgaggGCCAGCAGGAGCTGAAGGAGCTGACTGCGTCCTCTGTGGAGACGCTGCTGCAGAGTCAGGGTGCTCTGCTGGAGCAGCAGGGGGCGCTGCAGGCCGGGCAGCAGCAGCTGGACTCCTCCATCGGCGCCAACCTGGAGCAGCTGGGCCAGGAGAGGGCCCTCATCAGCGCTGGGCAACAGCACGTGGCTGAGCTCATACAGGGCATCACACAGCGCATGGAGAACGTGAGTGAGCACTTGAAAGGTCAAGGGTCAGAACTGCAGGAGGGACACCAGGCCATCCTAGCTGACCTGgctgaggtcagaggtcacgcCCAGGACATCTACAAGAAAATTGACCAGAACCTCTCTGGGTTCTTGCGCTATCAAAACCGCACCGCCCGGTTCTATGAGGACCTGATGGGGAAGCTGCAGCGCATGAACAGCACGCTGGGCGGCCTGGTCCACTTCCTGGATAGCATGCAGGGCCGGCTGGAAGACCGGCTGCACGCCATACAGGGCTACCTGGGCTGGGCAGgcTGCAGTCTGGCTGCTGTCTCCACCTGTGTGCTCCACGGGGGGTACCTGGTGCTGTGTGCGGTGCTGCTGTCATTCCTGCAGACCCCAGTGTTCTCCCGCGCCGCCCTGCTGGTCGCTGTGCCGCTCAACGCGCTGGCAGAGTTGCAGCACCAGCCGGGGCTCGACTTCACCGGCCtcagcctgctgctgctgttcctgTCACTGGGTCACTGGTTCCTGCTGCAGCTGTTCAGCAGCGCCGCGGCTCTGTGGTGCCGGCGAGCCGCAaccaccccttcactgcccccCCCACGGGCACTGGCCTCCGAGACTGATGCCTGCAGACTGGGCTGCCTGGCCTCCTCCACCCCTCACAgGCTCGTCTCCGAGGGAGGAGTGAAGCAGGAGCAGGACAGCAGTGTGTTTGATGACCCAGTGCTGACTGGCCTCTGTCCCTCCCCCAGCGACTTGCTGGGCAGGTTCCTGCCCCCTTTCCAGGGCACACCCACCCACTCCACCCCCCTGCTTAAGAGGCCCGCCCCACCTGGGCAGGTGGTGCTGGAGGGGCTGCCCCAGAGGCACCTGGGAACCCTGCTGGACGCGGTCAGTGACTCCCGCAGCGCCTCACCCAACCAGTCCCTCGCCAGCAACGGCTCTGTGTCGGGCCGGCAGCTGTGTCAGGGCATCACCAAGGCTGGCCTGCAGTGCAAGAAGAGGGCGCAGCTGGGCCATGACTACTGCCGCTTGCATGAGGGGGGGCACACCTCCTACAACAACCAACTCTGACCGCCCCCCACTCTCCGGCTGCGTGGGAGCAGTCGGACCGGAGCGTCTGGTCTGGACCTCCACTTCCACCCAATGCAATTATTTCCGCTGGTTGAGTTAGGAGGCAACTCTAACCACTCTCTCTGGATCTGTGATTGTTTTAGGGGCAGTTTTATCTTGCATCAGGGGTACTTCTTAAATCCTGTTGCCCCAGAGAACTACATGgctgggtgggtggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019020 True 2233 mRNA 0.63 13 1178120 1183904

Neighbor

gene id symbol gene type direction distance location
AMCG00019021 NA coding upstream 63901 1098229 ~ 1114219 (+)
AMCG00019016 mafa,LOC107704507 coding upstream 316723 860483 ~ 861397 (+)
AMCG00019017 NA coding upstream 330793 837999 ~ 847327 (+)
AMCG00019013 NA coding upstream 397491 780393 ~ 780629 (+)
AMCG00019011 NA coding upstream 427080 744154 ~ 751040 (+)
AMCG00019040 NA coding downstream 230706 1414610 ~ 1428982 (+)
AMCG00019041 NA coding downstream 370169 1554073 ~ 1557865 (+)
AMCG00019042 NA coding downstream 379119 1563023 ~ 1581623 (+)
AMCG00019050 NA coding downstream 444921 1628825 ~ 1641050 (+)
AMCG00019052 NA coding downstream 460463 1644367 ~ 1658275 (+)
G30723 NA non-coding upstream 38262 1138505 ~ 1139858 (+)
G30700 NA non-coding upstream 124235 1013011 ~ 1053885 (+)
G30699 NA non-coding upstream 151376 1009261 ~ 1026744 (+)
G30619 NA non-coding upstream 681600 443168 ~ 496520 (+)
G30583 NA non-coding upstream 806322 370446 ~ 371798 (+)
G30857 NA non-coding downstream 2493 1186397 ~ 1187225 (+)
G30866 NA non-coding downstream 12028 1195932 ~ 1196202 (+)
G30869 NA non-coding downstream 42925 1226829 ~ 1228441 (+)
G30874 NA non-coding downstream 53972 1237876 ~ 1238710 (+)
G30878 NA non-coding downstream 72536 1256440 ~ 1256647 (+)
G30698 NA other upstream 176907 995327 ~ 1001213 (+)
AMCG00019012 NA other upstream 434037 739226 ~ 744083 (+)
AMCG00018999 NA other upstream 621216 549516 ~ 556904 (+)
G30589 NA other upstream 779448 395501 ~ 398672 (+)
G30527 NA other upstream 1103889 73792 ~ 74231 (+)
AMCG00019029 NA other downstream 14082 1197986 ~ 1199095 (+)
AMCG00019030 NA other downstream 29772 1213676 ~ 1237637 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other downstream 69462 1253366 ~ 1253735 (+)
AMCG00019033 NA other downstream 134718 1318622 ~ 1321493 (+)
AMCG00019046 NA other downstream 401921 1585825 ~ 1605545 (+)

Expression


Co-expression Network