AMCG00019022


Basic Information

Item Value
gene id AMCG00019022
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1185228 ~ 1189475 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019022
tgtgtgtagtcaccgtgcatgtgtgtgtgtagtcacCGTGTGTGTGTAGTCACCgtgtctctgtgcgtgtgtgcatgcatgtgtgtgtgtgtagtcaccgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtatatagtcaccgtgtctgtgtgcgtgtgcaggaGTGCTGTGGAGACTCGCGCTGTGTTCCAGAAGCACCAGCCCACTGAGGTCATCCACCTGGCTGCCATGGTGGGGGGGCTGTTCCAGAACATGAGCCACAACCTGGACTTCTGGAGGAACAACGTGCACATAAACGACAACGTGCTGCAGGCCGCTCATGAGCTGGGCGTCCGCAAGGTGGTGTCCTGCCTGTCCACCTGCATCTTCCCTGACCGCACCAATTACCCCATCGATGAGACCATGGGACACGTGCTGCCCGGCCTCATCCACAAGACATACCTGGCACAGAGAGAGGGCACGGCTCTGGAGGTGTGGGGCTCGGGGACGCCACGTCGTCAGTTCATCTACTCTCTGGTACTGGGCGAGGAGGATGAGGTGTCCATCAAAGAGGCGGCGGAGTGCGTGGTGGAGTCGCTGGGGTTCAAAGGTCAGGTGGTGTTTGACACCAGCAAGTCAGACGGACAGTTCAAGAAGACGGCCAGCAACAAGAAGCTGAGGCAGTACCTGCCCGACTTTACCTTCACCCCCTTCAGACAAGCTGTCAAGGAGACCTGCGAGTGGTTCGTGGCCAACTATGACACTGCCCGGAAGTGACACCTCTGCCTCCCCATTGGAGGGACTGGGTGTCAATCAGTTGCTGCCGGTCACCTCAGGAAACCACGATATAGGGCTGGGTTAAAATGGGTGGAGCCTCTGAGATAGgcgtggtggtggtggtggtggtggtggtggtggtgtataGTACAAGACAAGAGCACTGCTGATACCACACAGAGACCTGCCCTGCGCCGAGGTTCCCACTGTGGTGTTACAACATCAAGCAGAAAGGAGAGCACAACCACATTAACTGAATTGTGCCCTGGAGCCTCCTCTGTTTTGTGACAGGTCTTGTGTTTTTATGGGTTGGAGGAGAGAGTCTGGTGTCCAGTTCCAGTTTCTTCAGTGTCATGTCCCCCTCTGTGCCTGTGCAGTTTAAGCAGGGTGTGCACAGGGCTGGGCACCTTATACAACAGGCCCTCGAACTTGTGAGAGGAAGACTGTAGGTTCGAATCCCAGCTGAGCCTCCCACTGATCAATGACTTTATAATAAGTAGTGTAGTctgggcagggcagggcagggctcTGGCAGGGCATCAGTAAAGCTACAGCCTGGCCATGGGGCAGCAACAGTCAGTGGCCTTTCTGTACTGACCGTGGCTGCCTGTACCGTTGGAGTTAGTCTCGCCCTGGTCACACTCACTCTCCACTCGGCCACCCTCAATGGCCTGGACACTCCTGCTATAACAATGGAAGGAAGGCTCTCAGACAGTGACAAACCAGGGGAAGCTGGGAAGTGTAATATTTTCCTCTTGTAAATGTACAATGCACATGCTCAGTGTTGCTGCTCAGGTAGTAATAAACCATTTGAAATAATAGGCA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG:

id description
K02377 TSTA3, fcl; GDP-L-fucose synthase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019022 True 1582 mRNA 0.55 7 1185228 1189475

Neighbor

gene id symbol gene type direction distance location
AMCG00019027 NA coding downstream 14054 1169873 ~ 1171174 (-)
AMCG00019028 NA coding downstream 16113 1160804 ~ 1169115 (-)
AMCG00019026 NA coding downstream 26374 1138221 ~ 1158854 (-)
AMCG00019023 NA coding downstream 51342 1115584 ~ 1133886 (-)
AMCG00019025 NA coding downstream 89384 1094840 ~ 1095844 (-)
AMCG00019032 NA coding upstream 1758 1191233 ~ 1193527 (-)
AMCG00019036 NA coding upstream 125601 1315076 ~ 1315516 (-)
AMCG00019035 NA coding upstream 135388 1324863 ~ 1344760 (-)
AMCG00019037 NA coding upstream 170346 1359821 ~ 1362959 (-)
AMCG00019038 NA coding upstream 237742 1427217 ~ 1432739 (-)
G30823 NA non-coding downstream 131343 1051085 ~ 1053885 (-)
G30809 NA non-coding downstream 291038 887649 ~ 894190 (-)
G30797 NA non-coding downstream 346119 834458 ~ 839109 (-)
G30784 NA non-coding downstream 451815 712712 ~ 733413 (-)
G30760 NA non-coding downstream 661232 522119 ~ 523996 (-)
G30871 NA non-coding upstream 37355 1226830 ~ 1232565 (-)
G30900 NA non-coding upstream 167833 1357308 ~ 1358163 (-)
G30932 NA non-coding upstream 316089 1505564 ~ 1505917 (-)
G31018 NA non-coding upstream 400104 1589579 ~ 1590721 (-)
G31038 nrbp2,LOC108267406,LOC108413492 non-coding upstream 543110 1732585 ~ 1733587 (-)
AMCG00019024 NA other downstream 7662 1175031 ~ 1177566 (-)
G30849 NA other downstream 10245 1174524 ~ 1174983 (-)
AMCG00019007 LOC106613553,LOC108443229 other downstream 550935 614398 ~ 634293 (-)
G30729 NA other downstream 685039 498732 ~ 500189 (-)
AMCG00018991 NA other downstream 708132 473449 ~ 477096 (-)
AMCG00019031 LOC107567020,LOC106939174 other upstream 50236 1239711 ~ 1260637 (-)
AMCG00019034 NA other upstream 132139 1321614 ~ 1323596 (-)
G31035 NA other upstream 516424 1705899 ~ 1710543 (-)
AMCG00019059 NA other upstream 692979 1882454 ~ 1896432 (-)
G31082 NA other upstream 742866 1932341 ~ 2083271 (-)

Expression


Co-expression Network