AMCG00019029


Basic Information

Item Value
gene id AMCG00019029
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1197986 ~ 1199095 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019029
ATGAGCAAGATCATCGTCTATGAGCATCCTGACTTCCAGGGGTTCAGCAGAGAGTTCACCTCTGACGTCCCCAACTTGAGGGAAGTCTGCTTTGACGACTGCATCTCCTCCGTGAAGGTGATTGGGCAGCCCTGGGTGCTGTACAGGGACCCCAACTATCAAGGGCAGCAGAGGGTCTTTGAGGAAGGAGAGTACGCCAGTGTGGAAGAGCATGACACCATCTCTTCCCTGCAGCTGGTGACCGAGGACCTGTCAGACCCTCAGATCACGCTGTACGAGCACGAGCGTTTCAAGGGCAAATGCATCGTCCTCACCTGTGAGACCAACCTGTGCCAGGCCTCCTTCAATGACACGGCCTCCTCCCACAAAGTGCAGAGAGGAGCCTGGGTCCTGTACGAACACATAGACAGAGGAGGGGTGCAGATGGTGGCCAGAGCTGGTGATGAGAAATCTGCATATGCATCAAGTGACAACCGGCTGTCCCACCTGCGCCCTCTGAAGCCGGGGAGGCCAACAGTGACAGCGGAGATCCTCTGGGACAAGAAGGAGGAGCAGGTGAGGTCCGTCACCATCGACTCCATGTGCAGCCTGAACCACAGTGACCACAAGCAGAGCTTCTCTGCAGGGCTGAGCCGAGAGCATGAGGTCTTGATCACTGAGACCTTCACATTCAGCGATTCGTCGCAGATAAGCAAGGGAGTGAGCTTCAGCATCGATGTGTCTCAGGCGAGGCTGAAGTTCAATGCTTCCACCTTCTCTGTGGAAAAGGGAGGAAGCAACACGAAAACCGAGAGGAAGAAGGTCCAGGTCAGCCTGCCAGTCAAACTCCATCCACGCACCAAGCTCACTGTGAAGGTGGTGAGGGAGGAGGTGGATGTGAAGGTGCCAGTCAAGCTAACTGTCACTCAGGGGGGGCGCAGTAAGACAGAGTATGGGGAGTACAGGTGCCAGTCTCGGCTCGCTCTCACCGCTGAGTACAgggaagagaagctgtag
>TU38629
ACAAGCAGAGCTTCTCTGCAGGGCTGAGCCGAGAGCATGAGGTCTTGATCACTGAGACCTTCACATTCAGCGATTCGTCGCAGATAAGCAAGGGAGTGAGCTTCAGCATCGATGTGTCTCAGGCGAGGCTGAAGTTCAATGCTTCCACCTTCTCTGTGGAAAAGGGAGGAAGCAACACGAAAACCGAGAGGAAGAAGGTCCAGGTCAGCCTGCCAGTCAAACTCCATCCACGCACCAAGCTCACTGTGAAGGTGGTGAGGGAGGAGGTGGATGTGAAGGTGCCAGTCAAGCTAACTGTCACTCAGGGGGGGCGCAGTAAGACAGAGTATGGGGAGTACAGGTGCCAGTCTCGGCTCGCTCTCACCGCTGAGTACAgggaagagaagctgtagatcagaGCAGAAAGGCAGGACAAGGAAGGAGAGGGATAAACCACTCTGACACCATAGTGAAGGTCCTGCCATTATAGTACAgatttacattcattatttgtcTGGCATGTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019029 True 996 mRNA 0.56 1 1197986 1198981
TU38629 False 506 lncRNA 0.52 1 1198590 1199095

Neighbor

gene id symbol gene type direction distance location
AMCG00019020 NA coding upstream 14082 1178120 ~ 1183904 (+)
AMCG00019021 NA coding upstream 83767 1098229 ~ 1114219 (+)
AMCG00019016 mafa,LOC107704507 coding upstream 336589 860483 ~ 861397 (+)
AMCG00019017 NA coding upstream 350659 837999 ~ 847327 (+)
AMCG00019013 NA coding upstream 417357 780393 ~ 780629 (+)
AMCG00019040 NA coding downstream 215515 1414610 ~ 1428982 (+)
AMCG00019041 NA coding downstream 354978 1554073 ~ 1557865 (+)
AMCG00019042 NA coding downstream 363928 1563023 ~ 1581623 (+)
AMCG00019050 NA coding downstream 429730 1628825 ~ 1641050 (+)
AMCG00019052 NA coding downstream 445272 1644367 ~ 1658275 (+)
G30866 NA non-coding upstream 1784 1195932 ~ 1196202 (+)
G30857 NA non-coding upstream 10761 1186397 ~ 1187225 (+)
G30723 NA non-coding upstream 58128 1138505 ~ 1139858 (+)
G30700 NA non-coding upstream 144101 1013011 ~ 1053885 (+)
G30699 NA non-coding upstream 171242 1009261 ~ 1026744 (+)
G30869 NA non-coding downstream 27734 1226829 ~ 1228441 (+)
G30874 NA non-coding downstream 38781 1237876 ~ 1238710 (+)
G30878 NA non-coding downstream 57345 1256440 ~ 1256647 (+)
G30887 NA non-coding downstream 111011 1310106 ~ 1310381 (+)
G30903 NA non-coding downstream 210376 1409471 ~ 1409958 (+)
G30698 NA other upstream 196773 995327 ~ 1001213 (+)
AMCG00019012 NA other upstream 453903 739226 ~ 744083 (+)
AMCG00018999 NA other upstream 641082 549516 ~ 556904 (+)
G30589 NA other upstream 799314 395501 ~ 398672 (+)
G30527 NA other upstream 1123755 73792 ~ 74231 (+)
AMCG00019030 NA other downstream 14581 1213676 ~ 1237637 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other downstream 54271 1253366 ~ 1253735 (+)
AMCG00019033 NA other downstream 119527 1318622 ~ 1321493 (+)
AMCG00019046 NA other downstream 386730 1585825 ~ 1605545 (+)
AMCG00019064 NA other downstream 662734 1861829 ~ 1885551 (+)

Expression


Co-expression Network