AMCG00019032


Basic Information

Item Value
gene id AMCG00019032
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1191233 ~ 1193527 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019032
ATGCGGGCAGTTTCTCCCTCCGCCGCACAGCTCCCAGCACCACCGCGGCCGCTGGACGGAGCCGCTGGACGGACGGAGGGGGAGGTAGAGCCGGGGTCATGTGACGAGCCGGCCGGGTCATGTGACGGCGGCATGGCGGCGCCCGTGGATGTCGGCGTGCGAGCGGAGTTCCCGTGGAGCCGGCAGCGGGTCCTGGAGCTCATCCGGCTGTACGAGACCGAGGAGGTGCTGTGGAATGGCCGCAGCCGCGACTACCACAACAAGGCGCAGCGCCAGGCCGCCCTGGACCGCCTCAGCGCCCGGCTCGCAGTGCCCGTGAACGAGGTGAATAAGAAGCTGATGAACCTTCGCACGTACTACAGTAAGGAGCTGGCAAAGGTGAAGCGGTCCCGGGTGCGTGGGGGCGGCGGGGCACCGGGGCAGGTGTACCGCTCGCAGTGGCCCTTCTTCCACCACATGGACCTGTTCCTCAGCACCCAGGTCGTCCCGCGCAAGACCGTCTTCCAGGAGCTTTGCGCTGAGGAGAACGGGGAATTGGAGGGGGaccctgagagaggaggaggaggaggagcagcactAGGCGGGGGGGTGCCAGGCAGCCGCGAGGACCTGAACCCTGACCCGGTGGCGGCCAGGGGGGAGGTGTCGAGCCCGGTGGGGGCGGCGGCGAGAGCGGGGCTGGCGGTCTCTCGAAGACGGCCCTCGGAGACGCTGCCCCGCGGCCAAGTCAAGAGACACCGCGAGGAGTTGCTGCTGCAGGAGGCCGTGAGAGCGTACCGCAGCGCCGCCGCCTCCCTCTCCACCGCGGCCCCGCCGCCGCCgttgccccccccccgccctgAGGATGAGGACGACGTGTTCGGGAAGCACGTGGCGAACGAGCTGCGCCTGGTGGGAGACCTGCGGAGCAAGCAGTTCGCCAAGCTGCAGATCCAGAACATCCTGTTCGAGGCGCAGTTCGGCCTGTCCCAGCTGCCACCCTTCGGTCCGGGCGAGGGCCAGGGGCCAGGTTACGGGCTGGGACCCCAGCCAGCCGCCGCCACCTCCCTCTCGTCCCCTGAGGGCCCCTACGACTCTGACTGCCCCCACGAGCCCTCCTGCTTACTCCCCTGCCACTCctctactcctcctcctcctcccccctcctctcgcAGGGACCCCTCCTCTTGGAAGAGCagcaaaaacagcagcagcagtggcgGGGCTGGAGCTGGGGCAGGGGGTAGTGAATGGTGCGAGCCACTGGAATGA

Function

GO: NA

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019032 True 1251 mRNA 0.69 3 1191233 1193527

Neighbor

gene id symbol gene type direction distance location
AMCG00019022 NA coding downstream 1758 1185228 ~ 1189475 (-)
AMCG00019027 NA coding downstream 20059 1169873 ~ 1171174 (-)
AMCG00019028 NA coding downstream 22118 1160804 ~ 1169115 (-)
AMCG00019026 NA coding downstream 32379 1138221 ~ 1158854 (-)
AMCG00019023 NA coding downstream 57347 1115584 ~ 1133886 (-)
AMCG00019036 NA coding upstream 121549 1315076 ~ 1315516 (-)
AMCG00019035 NA coding upstream 131336 1324863 ~ 1344760 (-)
AMCG00019037 NA coding upstream 166294 1359821 ~ 1362959 (-)
AMCG00019038 NA coding upstream 233690 1427217 ~ 1432739 (-)
AMCG00019039 NA coding upstream 261024 1454551 ~ 1470419 (-)
G30823 NA non-coding downstream 137348 1051085 ~ 1053885 (-)
G30809 NA non-coding downstream 297043 887649 ~ 894190 (-)
G30797 NA non-coding downstream 352124 834458 ~ 839109 (-)
G30784 NA non-coding downstream 457820 712712 ~ 733413 (-)
G30760 NA non-coding downstream 667237 522119 ~ 523996 (-)
G30871 NA non-coding upstream 33303 1226830 ~ 1232565 (-)
G30900 NA non-coding upstream 163781 1357308 ~ 1358163 (-)
G30932 NA non-coding upstream 312037 1505564 ~ 1505917 (-)
G31018 NA non-coding upstream 396052 1589579 ~ 1590721 (-)
G31038 nrbp2,LOC108267406,LOC108413492 non-coding upstream 539058 1732585 ~ 1733587 (-)
AMCG00019024 NA other downstream 13667 1175031 ~ 1177566 (-)
G30849 NA other downstream 16250 1174524 ~ 1174983 (-)
AMCG00019007 LOC106613553,LOC108443229 other downstream 556940 614398 ~ 634293 (-)
G30729 NA other downstream 691044 498732 ~ 500189 (-)
AMCG00018991 NA other downstream 714137 473449 ~ 477096 (-)
AMCG00019031 LOC107567020,LOC106939174 other upstream 46184 1239711 ~ 1260637 (-)
AMCG00019034 NA other upstream 128087 1321614 ~ 1323596 (-)
G31035 NA other upstream 512372 1705899 ~ 1710543 (-)
AMCG00019059 NA other upstream 688927 1882454 ~ 1896432 (-)
G31082 NA other upstream 738814 1932341 ~ 2083271 (-)

Expression


Co-expression Network