AMCG00019033


Basic Information

Item Value
gene id AMCG00019033
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1318622 ~ 1321493 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019033
ATGCTGATGCGCTGGTCTGTCGCCAGGAGCAGCCGGGCTCTGCTGGGAGCCGAGCGGCCAGGGCGTCGCTGTGCCCGGGGCAGCGGCACCTACACGCAGGGGCAGAGCCCGGAGCCGCGCATCCGCGAGTATTTCTACTACATAGACCACCAGGGCCagACCGAGGATAACGGATCACGGCTGCTGTGTCTGAAGCTGAAGAGCCTTAACAGAGACCCAACCAGCACTACAGCAGGGCGGGAGGCATCAACAGTCACCCATCAGTACTGGGACACTGCAGCCTGA
>TU38651
CGGACCTTCCCAGCTCAAGCGGTTCAGTGCAAAGTGGGAGAAGATcgcatttgtctttttaaattattattattattattattattattattttatttttttaacgcAGAAGGGTTTTTTGGATATAAGTCTGTGCAATGCTGATGCGCTGGTCTGTCGCCAGGAGCAGCCGGGCTCTGCTGGGAGCCGAGCGGCCAGGGCGTCGCTGTGCCCGGGGCAGCGGCACCTACACGCAGGGGCAGAGCCCGGAGCCGCGCATCCGCGAGTATTTCTACTACATAGACCACCAGGGCCaggtgacacacacactgtgcagcGCCGCACagtatacaacacacacacacacacacacacacacacacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019033 False 285 mRNA 0.64 2 1318780 1321493
TU38651 True 375 lncRNA 0.52 2 1318622 1319017

Neighbor

gene id symbol gene type direction distance location
AMCG00019020 NA coding upstream 134718 1178120 ~ 1183904 (+)
AMCG00019021 NA coding upstream 204403 1098229 ~ 1114219 (+)
AMCG00019016 mafa,LOC107704507 coding upstream 457225 860483 ~ 861397 (+)
AMCG00019017 NA coding upstream 471295 837999 ~ 847327 (+)
AMCG00019013 NA coding upstream 537993 780393 ~ 780629 (+)
AMCG00019040 NA coding downstream 93117 1414610 ~ 1428982 (+)
AMCG00019041 NA coding downstream 232580 1554073 ~ 1557865 (+)
AMCG00019042 NA coding downstream 241530 1563023 ~ 1581623 (+)
AMCG00019050 NA coding downstream 307332 1628825 ~ 1641050 (+)
AMCG00019052 NA coding downstream 322874 1644367 ~ 1658275 (+)
G30887 NA non-coding upstream 8241 1310106 ~ 1310381 (+)
G30878 NA non-coding upstream 61975 1256440 ~ 1256647 (+)
G30874 NA non-coding upstream 79912 1237876 ~ 1238710 (+)
G30869 NA non-coding upstream 90181 1226829 ~ 1228441 (+)
G30866 NA non-coding upstream 122420 1195932 ~ 1196202 (+)
G30903 NA non-coding downstream 87978 1409471 ~ 1409958 (+)
G30910 NA non-coding downstream 94458 1415951 ~ 1416163 (+)
G30937 NA non-coding downstream 231151 1552644 ~ 1552862 (+)
G30939 NA non-coding downstream 259778 1581271 ~ 1581489 (+)
G30996 NA non-coding downstream 616327 1937820 ~ 1938218 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 64887 1253366 ~ 1253735 (+)
AMCG00019030 NA other upstream 80985 1213676 ~ 1237637 (+)
AMCG00019029 NA other upstream 119527 1197986 ~ 1199095 (+)
G30698 NA other upstream 317409 995327 ~ 1001213 (+)
AMCG00019012 NA other upstream 574539 739226 ~ 744083 (+)
AMCG00019046 NA other downstream 264332 1585825 ~ 1605545 (+)
AMCG00019064 NA other downstream 540336 1861829 ~ 1885551 (+)
G31110 NA other downstream 820337 2141830 ~ 2147563 (+)
AMCG00019089 NA other downstream 1198611 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 1772959 3094452 ~ 3100171 (+)

Expression


Co-expression Network