AMCG00019034


Basic Information

Item Value
gene id AMCG00019034
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1321614 ~ 1323596 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019034
ATGCGTAGTCAACCGAGACCGCAGAAGCTGTTCCTGGACGACACCAGAGTGAAGAACTTCGTCACCTGTTTCAAAGACCGGCACTTCCTGGTGTTCTTCTTCAGCCGCCTGCGCCAGAACGAGAGCGGCCGCTACCAGGACTCCTTCCCCTTCCTGTCACTGTGCGGCCGCGAGCGCAACTTCCTGCGCTGCGACGACCGGCCAGTGGTCTTCACTCAGCTGCTGGGGTTCAACGCGGCggacggggacggggacggggaaggggaaggaggaggaggtgcgGCAGAGATGCacggaggaagagagggagagagagccaGTGAGGGCCTGGAGCTCCTCTCCTTCTGTGGCGGGGGCAGGGAGCTGGCCGTGCCCTTCCGCCCCCAGGCCCTGTACATGCACCCGGACTCTGGGCGGCTGTACCACCCGTGTGCCGGGCGGGCGGGGGCAGTGGGGCTGGTGCGCTCTGCTCTGGCCTTCCAGCTCAGCTCCCGGTTTGAGTACCCCTCCGGCCAGACCCTGACCACCCAGCCCACACACTTCCACTGGGCGGGGGAGCGGCATGTGCTGACCAATGAGCTGGCTGCACACTTCACTTAG
>TU38658
CTGCTGCCTGCTGTGTAGCGACACTGTCTGCACAGTGCTGGCTTGTATTCTGTATCATTACCAGCAGAGAAATAAGAAGCCACGATATTGAGTAATGCCGTCCTCCCAACCCACAGctacattgtttaaattgaatcaaaatattaataaagtagAAAAACTGGTAAACATTATAAATGGAGCATCGACTCCAAAACTGGATGACTCTAATAAAAAgctgttgttattttgtaaaacGTTCATGACACTGGAATTGCGGTCATTGGTGTGTGTGGACGTGTCTTGCCTGTGCAGGTACAGGCAGTGacacctgtgtgtgtcagggacGGTGGGCTCCTGGTGTCCCTGTGTGTTAATGCGGTTGCACGTGTCCTCTCTGTCCTCAGCTGTTCCTGGACGACACCAGAGTGAAGAACTTCGTCACCTGTTTCAAAGACCGGCACTTCCTGGTGTTCTTCTTCAGCCGCCTGCGCCAGAACGAGAGCGGCCGCTACCAGGACTCCTTCCCCTTCCTGTCACTGTGCGGCCGCGAGCGCAACTTCCTGCGCTGCGACGACCGGCCAGTGGTCTTCACTCAGCTGCTGGGGTTCAACGCGGCggacggggacggggacggggaaggggaaggaggaggaggtgcgGCAGAGATGCacggaggaagagagggagagagagccaGTGAGGGCCTGGAGCTCCTCTCCTTCTGTGGCGGGGGCAGGGAGCTGGCCGTGCCCTTCCGCCCCCAGGCCCTGTACATGCACCCGGACTCTGGGCGGCTGTACCACCCGTGTGCCGGGCGGGCGGGGGCAGTGGGGCTGGTGCGCTCTGCTCTGGCCTTCCAGCTCAGCTCCCGGTTTGAGTACCCCTCCGGCCAGACCCTGACCACCCAGCCCACACACTTCCACTGGGCGGGGGAGCGGCATGTGCTGACCAATGAGCTGGCTGCACACTTCACTTAGCACCCGGgggctgtgtgtggggggctgtGCTGCGATAGAGGGGCCACAGGCACACTGGAGACTGGGGAGGGGCGAGAGACAACTCCTGCACTTTACT
>TU38662
NNTGTGCACTGCCGCTCAgcatacaacacaacacacacagctcagcatacaacacaacacacgcACTGTGCACTGCCGCTCAGcatacaacacaacaacacacacagctcagcatacaacacacacacacacacacgcactgtgCACTGCCGCTCAGcatacaacacaacaaaacGCACAGCTCAgcatacaacacacacatacagcacagcatacaacacacacacacacacactgtgcaccAGCTCATAGTATACACACAGAAGACACACTGCACCGCCGCTCAGCATAAAGCACACACACCACTTTTGCACTGCCGTTCAGCATAGATTAACAAACTGTACAGTCGCaatatcaacacacacacactgtactgtacagccGCTCAAGTTAATCACACGCGTACTCTTCCACCCGGATTGACACACGCACTGTAATGCGTAGTCAACCGAGACCGCAGAAGGTGAACGCAAAGACACAGCGTCACTGCAAAGAGTTCAGATTGCCAGACACGCAAAGCACAGTGTCTTTAATGATTACACCTGCATCTACCCGCCCGTCTGCTGCTGCCTGCTGTGTAGCGACACTGTCTGCACAGTGCTGGCTTGTATTCTGTATCATTACCAGCAGAGAAATAAGAAGCCACGATATTGAGTAATGCCGTCCTCCCAACCCACAGctacattgtttaaattgaatcaaaatattaataaagtagAAAAACTGGTAAACATTATAAATGGAGCATCGACTCCAAAACTGGATGACTCTAATAAAAAgctgttgttattttgtaaaacGTTCATGACACTGGAATTGCGGTCATTGGTGTGTGTGGACGTGTCTTGCCTGTGCAGGTACAGGCAGTGacacctgtgtgtgtcagggacGGTGGGCTCCTGGTGTCCCTGTGTGTTAATGCGGTTGCACGTGTCCTCTCTGTCCTCAGCTGTTCCTGGACGACACCAGAGTGAAGAACTTCGTCACCTGTTTCAAAGACCGGCACTTCCTGGTGTTCTTCTTCAGCCGCCTGCGCCAGAACGAGAGCGGCCGCTACCAGGACTCCTTCCCCTTCCTGTCACTGTGCGGCCGCGAGCGCAACTTCCTGCGCTGCGACGACCGGCCAGTGGTCTTCACTCAGCTGCTGGGGTTCAACGCGGCggacggggacggggacggggaaggggaaggaggaggaggtgcgGCAGAGATGCacggaggaagagagggagagagagccaGTGAGGGCCTGGAGCTCCTCTCCTTCTGTGGCGGGGGCAGGGAGCTGGCCGTGCCCTTCCGCCCCCAGGCCCTGTACATGCACCCGGACTCTGGGCGGCTGTACCACCCGTGTGCCGGGCGGGCGGGGGCAGTGGGGCTGGTGCGCTCTGCTCTGGCCTTCCAGCTCAGCTCCCGGTTTGAGTACCCCTCCGGCCAGACCCTGACCACCCAGCCCACACACTTCCACTGGGCGGGGGAGCGGCATGTGCTGACCAATGAGCTGGCTGCACACTTCACTTAGCACCCGGgggctgtgtgtggggggctgtGCTGCGATAGAGGGGCCACAGGCACACTGGAGACTGGGGAGGGGCGAGAGACAACTCCTGCACTTTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019034 False 600 mRNA 0.66 3 1321711 1323160
TU38658 False 1056 TUCP 0.58 2 1321614 1323033
TU38662 True 1619 TUCP 0.55 2 1321614 1323596

Neighbor

gene id symbol gene type direction distance location
AMCG00019036 NA coding downstream 6098 1315076 ~ 1315516 (-)
AMCG00019032 NA coding downstream 128087 1191233 ~ 1193527 (-)
AMCG00019022 NA coding downstream 132139 1185228 ~ 1189475 (-)
AMCG00019027 NA coding downstream 150440 1169873 ~ 1171174 (-)
AMCG00019028 NA coding downstream 152499 1160804 ~ 1169115 (-)
AMCG00019035 NA coding upstream 1267 1324863 ~ 1344760 (-)
AMCG00019037 NA coding upstream 36225 1359821 ~ 1362959 (-)
AMCG00019038 NA coding upstream 103621 1427217 ~ 1432739 (-)
AMCG00019039 NA coding upstream 130955 1454551 ~ 1470419 (-)
AMCG00019044 NA coding upstream 157723 1481319 ~ 1488123 (-)
G30871 NA non-coding downstream 89049 1226830 ~ 1232565 (-)
G30823 NA non-coding downstream 267729 1051085 ~ 1053885 (-)
G30809 NA non-coding downstream 427424 887649 ~ 894190 (-)
G30797 NA non-coding downstream 482505 834458 ~ 839109 (-)
G30784 NA non-coding downstream 588201 712712 ~ 733413 (-)
G30900 NA non-coding upstream 33712 1357308 ~ 1358163 (-)
G30932 NA non-coding upstream 181968 1505564 ~ 1505917 (-)
G31018 NA non-coding upstream 265983 1589579 ~ 1590721 (-)
G31038 nrbp2,LOC108267406,LOC108413492 non-coding upstream 408989 1732585 ~ 1733587 (-)
G31064 klhl18,LOC107657445 non-coding upstream 525942 1849538 ~ 1851593 (-)
AMCG00019031 LOC107567020,LOC106939174 other downstream 60977 1239711 ~ 1260637 (-)
AMCG00019024 NA other downstream 144048 1175031 ~ 1177566 (-)
G30849 NA other downstream 146631 1174524 ~ 1174983 (-)
AMCG00019007 LOC106613553,LOC108443229 other downstream 687321 614398 ~ 634293 (-)
G30729 NA other downstream 821425 498732 ~ 500189 (-)
G31035 NA other upstream 382303 1705899 ~ 1710543 (-)
AMCG00019059 NA other upstream 558858 1882454 ~ 1896432 (-)
G31082 NA other upstream 608745 1932341 ~ 2083271 (-)
G31130 NA other upstream 854384 2177980 ~ 2178650 (-)
AMCG00019109 NA other upstream 2896847 4220443 ~ 4229991 (-)

Expression


Co-expression Network