AMCG00019040


Basic Information

Item Value
gene id AMCG00019040
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1414610 ~ 1428982 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019040
ATGGAGAGGACTGCTGTGGTTTTTCTAGTTACCATGTGTCAGACCTCTTATTACCTGAATGACACCTCACCGAAGACGTGGAGTGAGGCGCAGAAGTATTGCCAGACCTGCTACACAGACCTGGTCACTGTGACAGCTGTGAATGAGGCCGACATATATCCTTTCGGGTCGTTTTGGATCGGGCTGAACAAGATCAATAGTTCAGAGTGGAGGTGGTCGAACGGGGACCCACTGAGTTACCAAAACTGGGGCGGTTTAAAGCCCGTGGGGCCCGATGAGAGTGAGGACTGTGCTGTGGTAGAGTCTTCATTGTGGAGGAATGCCTCCTGTACTGAGTTACACAATTTTGTCTGCTATGCAGTGCCCCATCCTGGAGCAGTCAGAGTGCTCTCTGTAGACACGAACTCTGCATCTCTACAATGGGGAGTCGCGCAAGGAATAGCTGATACCCCACACACCTACAGAGTGGTCTACAGCTCTATCTATGACATGGGCATCGTTGTTGCTAAGTCCAATGCTACAGTCCTCACTAACCTCCGAACAGGGACTTCCTATTCAATCACAATCACAACAGTGCTCTTCAATGGGTATGAAAGCATGGGTTCTTCTTATGGATCATTCCTCACAGcTGCCCCAAATCTAAGAACCATCAGTGTGATTTCAGTGACTGcaacctctgtctctctgtactGGGACAGTCCTGGACTGGCTGGCATCCCACACATGTTCACTGTGACCTACAGCAATGTTTTCTGGGGTCACAAAGGCTCTGCCTTTCCGACCGTTAACTCCATTGACGTCACTGACCTGCACCCAGGCTCGGAATACCTCTTCAGCGTCACCACAATGCAGTCAAACGGGGCAACCAGCAACACCATTTCAATTACTGTATTCACAGCTCCTTCCCCACCAAACAATGTCTCTGTGGTATCTGTGTCTGTTAACTCGGTCTCTCTGAGTTGGGGGAGGCCAGCAGAGATGGACGGCCTCACATACAACTTCAGAGTGTCCTACAGCAGCCCTTACTGGGGAGACCTTAGCTCCAGCACCATGAACATGAATTCCATCATCATCTCGAACCTGAGACCAGGGAGCAAGTACAGCGTCAGTGTCACCACAGTGCAGGATACAGGTGCACATGAGGAACGTGCAGTCCTGACATTCCAGTGCAGCTCCACTGACCCCAATAAGTGCCAGACCCCCCAGGCCAGAGAACAGGCTCTGTACAAGGCTCTGGTTGAGGAACAGGGCCTCGGCGTCAAGTCCTTCCCCTGCGTCCCCACCCCCGGCCTCCACGGTCTGGGTGGCCTGGTCCTGCAGGGGCTCGTTGGGGGACAGCGCCCCCTGCTGGGAGTATCCGGCTGGGAAGACCGGCTTGCTGCGGTTGAGGACGTACATTTCGTGTCCGCGCTCGTCCCGGTACTCCTCCAGCTGGGCGAAGGTGGTGGGCCCGTCGGAGTAGTCGTTGACGTAGAGGATGCTCTCCTCCTTGTGGCCCTTCTTGCGGTGCTGGTGGCGGCTGTAGATCATGGCAATGAGCAGCAGGGCTGTGAGGGCGAGCAGAGAGATGCCCACAGCGATGGTGGTCTGCGTGGCCATGCTGAGCGCATTGAAGTCCATGCTCTCGAGGTCATACAGCGGCTCCTGGCTGATGTCCAGGGCTGGGTAGGAGTGCGAGCGCTGCGTGCCGGACGACAGGTTGACCGCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019040 True 1710 mRNA 0.55 7 1414610 1428982

Neighbor

gene id symbol gene type direction distance location
AMCG00019020 NA coding upstream 230706 1178120 ~ 1183904 (+)
AMCG00019021 NA coding upstream 300391 1098229 ~ 1114219 (+)
AMCG00019016 mafa,LOC107704507 coding upstream 553213 860483 ~ 861397 (+)
AMCG00019017 NA coding upstream 567283 837999 ~ 847327 (+)
AMCG00019013 NA coding upstream 633981 780393 ~ 780629 (+)
AMCG00019041 NA coding downstream 125091 1554073 ~ 1557865 (+)
AMCG00019042 NA coding downstream 134041 1563023 ~ 1581623 (+)
AMCG00019050 NA coding downstream 199843 1628825 ~ 1641050 (+)
AMCG00019052 NA coding downstream 215385 1644367 ~ 1658275 (+)
AMCG00019053 nrbp2,nrbp2a coding downstream 301913 1730895 ~ 1740826 (+)
G30903 NA non-coding upstream 4652 1409471 ~ 1409958 (+)
G30887 NA non-coding upstream 104229 1310106 ~ 1310381 (+)
G30878 NA non-coding upstream 157963 1256440 ~ 1256647 (+)
G30874 NA non-coding upstream 175900 1237876 ~ 1238710 (+)
G30869 NA non-coding upstream 186169 1226829 ~ 1228441 (+)
G30937 NA non-coding downstream 123662 1552644 ~ 1552862 (+)
G30939 NA non-coding downstream 152289 1581271 ~ 1581489 (+)
G30996 NA non-coding downstream 508838 1937820 ~ 1938218 (+)
G30943 NA non-coding downstream 609665 2038647 ~ 2083269 (+)
G31104 NA non-coding downstream 668199 2097181 ~ 2099152 (+)
AMCG00019033 NA other upstream 93117 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 160875 1253366 ~ 1253735 (+)
AMCG00019030 NA other upstream 176973 1213676 ~ 1237637 (+)
AMCG00019029 NA other upstream 215515 1197986 ~ 1199095 (+)
G30698 NA other upstream 413397 995327 ~ 1001213 (+)
AMCG00019046 NA other downstream 156843 1585825 ~ 1605545 (+)
AMCG00019064 NA other downstream 432847 1861829 ~ 1885551 (+)
G31110 NA other downstream 712848 2141830 ~ 2147563 (+)
AMCG00019089 NA other downstream 1091122 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 1665470 3094452 ~ 3100171 (+)

Expression


Co-expression Network