AMCG00019047


Basic Information

Item Value
gene id AMCG00019047
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1624468 ~ 1628122 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019047
GCTTCATTCTGGAGAGTTCTGTAGATGTAACCGCCTGCCTGGCTCTTCTGGCTGCTTACCTCATCATGTGCATTTAATGAAGAACTCGGTGGAAAATCCTTCGTTACTCTGTGTGTAGTCACACCGGGAATATGACAATTTCTGCTGTAAAGTGTCACTGACCAATGGAAATTATTCCTTGACATTCTACACATTTCATCACTCTGTTGTCTTCTGCAAACATGGACAATCACAGTCGAGACACGTTGCAATTTCCTGCGAGTGGCTGAACATTTGGTAAAGGGGGAAACACTGACACTGTCATGGTTTTCCTGTAGTAAAAGTTTTAAGAACCCAGTGGAGGGATAAAGTGCCAAAGCTGGACATCCTCATAATTCTCACAGGGCTTTGGACACAAATAAGGTTGTTGTGCACAAATGTGCTTCGCAGTGGAAatgctcctccttctcctcctgaCTGCTCAGCTGAGCTCCTCCACCAGTGGTCTAGAAAAAACCAACCTGCGAATCgaaagagaaacacagcacCCCATTTACTGTCACTATGAATTTTACACGGTCGATGGTCTGGAATACTGCTGTATAGGAAACACCAGCGACTGCTGCAACATTGTGATTAACAGAAGCAATGACTCAAAATGGAGGGGCTTGGAGGACGAGCCGCTGTGGCTGAACTCAACCCTAAGTCTGTGCATCAAGCTTTATTATCAGTTTTGCTCCAAAGCCATCGGCAGGGCGGAAGACATTACTTCTACTTCTACAAGTTCGGAGTCTGGGGTCCTGGTGATCGCGGTGACAGTGGCAGTCACCCTCACCGTCCTGCTGCCGGTGGCCATTTTACTGCTGAGGCCTCAGAAGAGAGCAGTCGGAAGAAGAGCAGTGGCCGAAGCATTTCAGTCTGTCTGCGCAAGAGTCAGCATGagccgagcagcagcagccccacaCTCCTCCTAACTCCAGTCCCAGTCTGCCCAGCGCAGGCGCAGCGGGCTGATCGTGCCACTGGGTGGAGCCGCTGCGGTGCAGTCAGAGCTCCCCGCCCGGGATTCCAAGCTCCCCTAAGCACTCCGCACCGCAGTGACTCCGTCCACCAGAGTTTTAAAGCCGTTACGCCAAAAAATCAGGTCTCCACatgggaggcttaacactgtactgattaCATCACTTGTAACCTGCTCATATACCAtatgagccccattacatatatattcatatatatttttgtcctcAACAGAGTGCTGCCCAATTCCAACACAGTATCAGTACAGACAGCAGCGGCTACATGACCATGCAGAGCCTGGATGTAAAAGCCCCGAATGGGGCAACCACTGGGATGGCAACTGTGAGATGAACAATCATTCAGTCACATGTCATTCTGTCTGTCGTCAAGCCAATTACAGTAATTCATCGTTCAAGAAATGTTCAATCAGCAACTCTTACACGCCTGGAGTCATGTTCTTCTGGTCCCTTACGCAGATGGTTTTGGTAAACTGTACTGTAGAGATCAAATTCTTCAGATACTTACATATACTTATGTATACATATTCTTACACaatattgttgtcattatttatcTATGCATCTAGTGCAGTAGCATTAGTTGATCTATATGCACTCGAAATTTGACTGTAGGTCAGAAGGCAGGTGACTTCAAACCTCAAATTGTACATTTCTCTGattttgtaattgtgtgtatttatgtgtgtatgtatatgcttTTTTGTTAAGTACCATTTCTATAAATCTATGAATCTTCAATGGCATATGGATTTTGCTTCAGttgaattttgttttgatattataGTTTTTGTATGCTTcaattcttaaataaataaaaaatatttttgtttgtga

Function

GO: NA

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019047 True 1853 mRNA 0.45 6 1624468 1628122

Neighbor

gene id symbol gene type direction distance location
AMCG00019048 NA coding downstream 6777 1616748 ~ 1617691 (-)
AMCG00019049 NA coding downstream 7767 1608998 ~ 1616701 (-)
AMCG00019043 NA coding downstream 92179 1509123 ~ 1532289 (-)
AMCG00019045 NA coding downstream 128872 1494056 ~ 1495596 (-)
AMCG00019044 NA coding downstream 136345 1481319 ~ 1488123 (-)
AMCG00019055 NA coding upstream 57043 1685165 ~ 1700550 (-)
AMCG00019058 NA coding upstream 205349 1833471 ~ 1841486 (-)
AMCG00019067 NA coding upstream 310423 1938545 ~ 1957060 (-)
AMCG00019066 NA coding upstream 357983 1986105 ~ 2011157 (-)
AMCG00019065 NA coding upstream 392243 2020365 ~ 2030234 (-)
G31018 NA non-coding downstream 33747 1589579 ~ 1590721 (-)
G30932 NA non-coding downstream 118551 1505564 ~ 1505917 (-)
G30900 NA non-coding downstream 266305 1357308 ~ 1358163 (-)
G30871 NA non-coding downstream 391903 1226830 ~ 1232565 (-)
G30823 NA non-coding downstream 570583 1051085 ~ 1053885 (-)
G31038 nrbp2,LOC108267406,LOC108413492 non-coding upstream 104463 1732585 ~ 1733587 (-)
G31064 klhl18,LOC107657445 non-coding upstream 221416 1849538 ~ 1851593 (-)
G31074 NA non-coding upstream 242249 1870371 ~ 1881183 (-)
G31075 NA non-coding upstream 244623 1872745 ~ 1874348 (-)
G31021 NA non-coding upstream 347582 1975704 ~ 2061961 (-)
AMCG00019034 NA other downstream 300872 1321614 ~ 1323596 (-)
AMCG00019031 LOC107567020,LOC106939174 other downstream 363831 1239711 ~ 1260637 (-)
AMCG00019024 NA other downstream 446902 1175031 ~ 1177566 (-)
G30849 NA other downstream 449485 1174524 ~ 1174983 (-)
AMCG00019007 LOC106613553,LOC108443229 other downstream 990175 614398 ~ 634293 (-)
G31035 NA other upstream 77777 1705899 ~ 1710543 (-)
AMCG00019059 NA other upstream 254332 1882454 ~ 1896432 (-)
G31082 NA other upstream 304219 1932341 ~ 2083271 (-)
G31130 NA other upstream 549858 2177980 ~ 2178650 (-)
AMCG00019109 NA other upstream 2592321 4220443 ~ 4229991 (-)

Expression


Co-expression Network