AMCG00019052


Basic Information

Item Value
gene id AMCG00019052
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1644367 ~ 1658275 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019052
GATCTGACAGCCTGACGTGTGTGTCAGAAGTAATGGGACGAAAGGGAGAGTCAGTCAGCGTTGTGTGTCACTATGAGCTCCAGTACAGAGACAATGTGAAATACTTCTGTAAAGGGTATTACTGGAGGAGCTGCAGCCCTGTGATACAGACAGACTCTCACACAGCTGGAGAGAAAGTGTCAATCAGGGAGCAGAAAACTCTGGGAATATTCACCTTCACAATGCGACACCTGCAGAAGAAGGATGAAGGCTGGTACTGGTGTGCTCTTAAAACACAGCAAGATTACATTGAAATTACTTATCTCTATCTCAGAGTGGATGAAGGGGATTATGATCTGTCAATCAACAGTCCCACTAACCTGTTTACTGGTCAGAAAGGCGGCTCAGTCAGTGTCTCCTGTCGATATAATCAAAAATACACAAGCAATGTGAAATACTGGTGCAGAGGGAGAGCCTGGAAATCCTGTCTGGAGATAATAAGATCAGAGTCTCTCCAGTCACACAGCAACAGAGTGTCAATTGAGGACGATACAAGACAGAGAGTATTCACTGTGACTGTGAGCAGGCTGGAGAAGACAGACTCAGACTGGTACTGGTGTGCCATAGAGAGAGGAGGAGCTGTTGATGAAGGAGTCACTGTTTACATCACTGTATCTGATGGATCTGACAGCCTGACGTGTGTGTCAGAAGTAATGGGACGAAAGGGAGGGTCAGTCAGCGTTGTGTGTCACTATGAGCTCCAGTACAGAGACCATGTGAAATACTTCTGTAAAGGGTATTACTGGAGTAGCTGCAGCCCTGTGATACAGACAGACTCTCACACAGCTGGAGAGAAAGTGTCAATCAGGGAGCAGAAAACTCAGGGAAGATTCACCTTCACAATGCGACACCTGCAGAAGAAGGACGAAGGCTGGTACTGGTGTGCCATAAAAAGCAGATGGACAAGAATGTATCATAAATGCATTTCTCTCTATTTGAGAGTGGATGAAGGGTATTACGATCTGTCAATCAACAGTCCCACTAACCTGTTTACTGGTCAGGAAGGCGGCTCAGTCAGTGTCTCCTGTCGATATAATCAAAAATACACAAGCAATGTGAAATACTGGTGCAGAGGGAGAGCCTGGAAATCCTGTCTGGAGATAATAAGATCAGAGTCTCTCCAGTCACACAGCAACAGAGTGTCAATTGAGGACGATACAAGACAGAGAGTATTCACTGTGACTGTGAGCAGGCTGGAGAAGACAGACTCAGACTGGTACTGGTGTGCCATAGAGAGAGGAGGAGCTGTTGAAGGAGTCACTGCTTACATCACTGTATCTGATGCAATAAAAACGACACCACGCCCAACAACCACCACCGCAGCCCTCCCCACCGCAGTGTCCACAGCAGCCACCAcagtccccccacccccggcaGTGTCCACAGCAGGCATCACCAGGACCACCAGAGCTCCAGTCAGCACCTCCACAGAGCCGCACACCCACAGACACAGCACTCGACTCATCACACCCAGCGTTTCCAAGCATACCACCAGGACAGCCGTCTCAGTGACCTGTGGCTTTCTTGTGGTGGCCCTGGGAGCCTCTCTCACCCTCTGGGCGGTCAACAACAGAAGAGGCAAGCAAGCCCTGCTACTGAAAATGAGCTCAGTAGTGTCTGCCTCCCAGAATAGAGTAAACCCCTCCGTCTCTCCTGCTCCCAGAGAAGTGCTCAACCTCTACCTTCTACTCCTCAGGCCCCAGGTGAACCGGCAGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019052 True 1757 mRNA 0.50 7 1644367 1658275

Neighbor

gene id symbol gene type direction distance location
AMCG00019050 NA coding upstream 3317 1628825 ~ 1641050 (+)
AMCG00019042 NA coding upstream 62744 1563023 ~ 1581623 (+)
AMCG00019041 NA coding upstream 86502 1554073 ~ 1557865 (+)
AMCG00019040 NA coding upstream 215385 1414610 ~ 1428982 (+)
AMCG00019020 NA coding upstream 460463 1178120 ~ 1183904 (+)
AMCG00019053 nrbp2,nrbp2a coding downstream 72620 1730895 ~ 1740826 (+)
AMCG00019051 LOC106568618 coding downstream 87447 1745722 ~ 1758318 (+)
AMCG00019054 NA coding downstream 103399 1761674 ~ 1762096 (+)
AMCG00019057 NA coding downstream 125502 1783777 ~ 1831277 (+)
AMCG00019056 klhl18,LOC107657445,LOC107733883,LOC107701005,LOC107730797 coding downstream 184513 1842788 ~ 1852369 (+)
G30939 NA non-coding upstream 62878 1581271 ~ 1581489 (+)
G30937 NA non-coding upstream 91505 1552644 ~ 1552862 (+)
G30910 NA non-coding upstream 228204 1415951 ~ 1416163 (+)
G30903 NA non-coding upstream 234409 1409471 ~ 1409958 (+)
G30887 NA non-coding upstream 333986 1310106 ~ 1310381 (+)
G30996 NA non-coding downstream 279545 1937820 ~ 1938218 (+)
G30943 NA non-coding downstream 380372 2038647 ~ 2083269 (+)
G31104 NA non-coding downstream 438906 2097181 ~ 2099152 (+)
G31117 NA non-coding downstream 518873 2177148 ~ 2177356 (+)
G31141 NA non-coding downstream 530693 2188968 ~ 2209189 (+)
AMCG00019046 NA other upstream 38822 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 322874 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 390632 1253366 ~ 1253735 (+)
AMCG00019030 NA other upstream 406730 1213676 ~ 1237637 (+)
AMCG00019029 NA other upstream 445272 1197986 ~ 1199095 (+)
AMCG00019064 NA other downstream 203554 1861829 ~ 1885551 (+)
G31110 NA other downstream 483555 2141830 ~ 2147563 (+)
AMCG00019089 NA other downstream 861829 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 1436177 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 1532337 3190612 ~ 3210890 (+)

Expression


Co-expression Network