Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019053 |
| gene name | nrbp2,nrbp2a |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 1730895 ~ 1740826 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| nrbp2a | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport; intracellular signal transduction; and protein phosphorylation. Predicted to be active in cytoplasm and endomembrane system. Orthologous to human NRBP2 (nuclear receptor binding protein 2). |
| nrbp2 | Predicted to enable protein serine/threonine kinase activity. Involved in negative regulation of macroautophagy. Predicted to be active in cytoplasm and endomembrane system. |
| description |
|---|
| PREDICTED: nuclear receptor-binding protein 2 isoform X2 |
| id | name | namespace |
|---|---|---|
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019053 | True | 1386 | mRNA | 0.60 | 15 | 1730895 | 1740826 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019052 | NA | coding | upstream | 72620 | 1644367 ~ 1658275 (+) |
| AMCG00019050 | NA | coding | upstream | 89845 | 1628825 ~ 1641050 (+) |
| AMCG00019042 | NA | coding | upstream | 149272 | 1563023 ~ 1581623 (+) |
| AMCG00019041 | NA | coding | upstream | 173030 | 1554073 ~ 1557865 (+) |
| AMCG00019040 | NA | coding | upstream | 301913 | 1414610 ~ 1428982 (+) |
| AMCG00019051 | LOC106568618 | coding | downstream | 4896 | 1745722 ~ 1758318 (+) |
| AMCG00019054 | NA | coding | downstream | 20848 | 1761674 ~ 1762096 (+) |
| AMCG00019057 | NA | coding | downstream | 42951 | 1783777 ~ 1831277 (+) |
| AMCG00019056 | klhl18,LOC107657445,LOC107733883,LOC107701005,LOC107730797 | coding | downstream | 101962 | 1842788 ~ 1852369 (+) |
| AMCG00019060 | NA | coding | downstream | 234764 | 1975590 ~ 1980497 (+) |
| G30939 | NA | non-coding | upstream | 149406 | 1581271 ~ 1581489 (+) |
| G30937 | NA | non-coding | upstream | 178033 | 1552644 ~ 1552862 (+) |
| G30910 | NA | non-coding | upstream | 314732 | 1415951 ~ 1416163 (+) |
| G30903 | NA | non-coding | upstream | 320937 | 1409471 ~ 1409958 (+) |
| G30887 | NA | non-coding | upstream | 420514 | 1310106 ~ 1310381 (+) |
| G30996 | NA | non-coding | downstream | 196994 | 1937820 ~ 1938218 (+) |
| G30943 | NA | non-coding | downstream | 297821 | 2038647 ~ 2083269 (+) |
| G31104 | NA | non-coding | downstream | 356355 | 2097181 ~ 2099152 (+) |
| G31117 | NA | non-coding | downstream | 436322 | 2177148 ~ 2177356 (+) |
| G31141 | NA | non-coding | downstream | 448142 | 2188968 ~ 2209189 (+) |
| AMCG00019046 | NA | other | upstream | 125350 | 1585825 ~ 1605545 (+) |
| AMCG00019033 | NA | other | upstream | 409402 | 1318622 ~ 1321493 (+) |
| G30877 | arhgap39,LOC106560380,LOC106584197 | other | upstream | 477160 | 1253366 ~ 1253735 (+) |
| AMCG00019030 | NA | other | upstream | 493258 | 1213676 ~ 1237637 (+) |
| AMCG00019029 | NA | other | upstream | 531800 | 1197986 ~ 1199095 (+) |
| AMCG00019064 | NA | other | downstream | 121003 | 1861829 ~ 1885551 (+) |
| G31110 | NA | other | downstream | 401004 | 2141830 ~ 2147563 (+) |
| AMCG00019089 | NA | other | downstream | 779278 | 2520104 ~ 2618052 (+) |
| AMCG00019096 | LOC107727496 | other | downstream | 1353626 | 3094452 ~ 3100171 (+) |
| AMCG00019100 | crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 | other | downstream | 1449786 | 3190612 ~ 3210890 (+) |
