AMCG00019060


Basic Information

Item Value
gene id AMCG00019060
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1975590 ~ 1980497 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019060
atgtattcagTGGTTCTATATAACACACATGATCAGGTTTTAATCCTTTTCCATCGTGCTGCTCTTGCAGGTGCTGATGCCATGTCAACACTGAGACAGACCAGTGTCCGTAGAAAAGGATCAGTCACCATCCCTTGTCACTAcgagaacaaatacaaaagctaTGTGAAAACCTGGTGCTCTGGATATTCCTGGACAAGCTGTAAGCCTCTACAAAGGACTGACTCTCCAATCACAGACAGTGATAAAGTGTCCATCTCTGATGATCCAGCCCAGGGGGTCTTCACTGTGACCTTGAGGAGACTGGAGACGCGGGACTCAGGGTGGTACTGGTGTGCTGTGGAGACAGGGGGAAACAAGACACATGATGACAGAGCATCCCTGTACCTCATAGTTACTGAAGACGCTGCGGTGCCGTATGTGGTCAATCCCACAATAACAGGACAGATAGGAGGGGGGGTCAGTGTCCAGTGTCGATATGGACACCCATACCGGGGCAGCCAGAAACAGTGGTGCAGGAGTGGAGACTGGAGCTCCTGTCAGACAGCAGGAAGCCCTGGGACTGCAGGACACGGCTCTGTCCTGATCACTGACCACACAGCGGAGGGACTCTTCAGTGTGACTGTGAGCGGACTGCGGCCGGAGGACCAAGGCTGGTACTGGTGTGATATAGGGAACCAACAGCTTCCCGTTCACCTTCAAGTTACTGAAGGTAAGGATCAGCACTGCTTGAGCCGTCATCCCgtgtttaaaactgaaaccCAAAAATACCATAATGCCGttaatgtatgtgtctgtgttaaGGACAGTCAGATGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019060 True 819 mRNA 0.51 2 1975590 1980497

Neighbor

gene id symbol gene type direction distance location
AMCG00019056 klhl18,LOC107657445,LOC107733883,LOC107701005,LOC107730797 coding upstream 123221 1842788 ~ 1852369 (+)
AMCG00019057 NA coding upstream 144313 1783777 ~ 1831277 (+)
AMCG00019054 NA coding upstream 213494 1761674 ~ 1762096 (+)
AMCG00019051 LOC106568618 coding upstream 217272 1745722 ~ 1758318 (+)
AMCG00019053 nrbp2,nrbp2a coding upstream 234764 1730895 ~ 1740826 (+)
AMCG00019063 NA coding downstream 36649 2017146 ~ 2030576 (+)
AMCG00019062 NA coding downstream 50757 2031254 ~ 2034414 (+)
AMCG00019061 NA coding downstream 81220 2061717 ~ 2062756 (+)
AMCG00019068 NA coding downstream 189579 2170076 ~ 2174807 (+)
AMCG00019072 NA coding downstream 197430 2177927 ~ 2188659 (+)
G30996 NA non-coding upstream 37372 1937820 ~ 1938218 (+)
G30939 NA non-coding upstream 394101 1581271 ~ 1581489 (+)
G30937 NA non-coding upstream 422728 1552644 ~ 1552862 (+)
G30910 NA non-coding upstream 559427 1415951 ~ 1416163 (+)
G30903 NA non-coding upstream 565632 1409471 ~ 1409958 (+)
G30943 NA non-coding downstream 58150 2038647 ~ 2083269 (+)
G31104 NA non-coding downstream 116684 2097181 ~ 2099152 (+)
G31117 NA non-coding downstream 196651 2177148 ~ 2177356 (+)
G31141 NA non-coding downstream 208471 2188968 ~ 2209189 (+)
G31143 NA non-coding downstream 210924 2191421 ~ 2192208 (+)
AMCG00019064 NA other upstream 90039 1861829 ~ 1885551 (+)
AMCG00019046 NA other upstream 370045 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 654097 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 721855 1253366 ~ 1253735 (+)
AMCG00019030 NA other upstream 737953 1213676 ~ 1237637 (+)
G31110 NA other downstream 161333 2141830 ~ 2147563 (+)
AMCG00019089 NA other downstream 539607 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 1113955 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 1210115 3190612 ~ 3210890 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 2339099 4319596 ~ 4368203 (+)

Expression


Co-expression Network