AMCG00019071


Basic Information

Item Value
gene id AMCG00019071
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2140521 ~ 2141953 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019071
CTGAGGGGCCACAGAGCCCAGCCCTCAGACCTGCTGCTCTCCCAGCGCTGAGAGGAAGATGAGCCGCCTGCTGCCTGTGCTGCTGCTCACTGCCGGGGCCCTGCTGGCCCCCACCGAGGGGCAGAGCCCCTTCCACCTCAACCAGCTGGAGCAAAGAGCTGTGAACGCTGTTATTAAACACTTCAATGGGAGTAACCGCTTGAAGAAAGCCTTCCACATCCACACAGAGTCAAGGGTGTCTGCGACCACTGTCACAGAGGCTGGTGGGACCTTCCACAGCTTGGAGATCTATGTGAAGGAGACGGACTGTCCTCATGATGTCCCCTCAACACAGGACTGCAAGATCCTGCCCAGCGGGGCACTGAGGATCTGTAAGGCATGCTTTGCAGTCACTGCCCCCGAAGACTTCCACAGCGCCAAGAGATACATCGACTGCACCCCTGTACGAGTCATGAACAAGTGTCGCCTGGCCACCTCCATGTCTGGGCCCTCAATCAGAGACCCAGGGGCTGCAACTCCGGTGCCAGAGACCCTGTCCTTCAGCTCCAGCCAAGTTCTGCCAGTTTAA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019071 True 568 mRNA 0.59 4 2140521 2141953

Neighbor

gene id symbol gene type direction distance location
AMCG00019069 NA coding downstream 41712 2096984 ~ 2098809 (-)
AMCG00019070 NA coding downstream 91437 2038699 ~ 2049084 (-)
AMCG00019065 NA coding downstream 110287 2020365 ~ 2030234 (-)
AMCG00019066 NA coding downstream 129364 1986105 ~ 2011157 (-)
AMCG00019067 NA coding downstream 183461 1938545 ~ 1957060 (-)
AMCG00019074 ubtfl,LOC107718032 coding upstream 49443 2191396 ~ 2203852 (-)
AMCG00019073 NA coding upstream 66837 2208790 ~ 2234517 (-)
AMCG00019078 NA coding upstream 149547 2291500 ~ 2298668 (-)
AMCG00019080 NA coding upstream 161917 2303870 ~ 2312400 (-)
AMCG00019079 NA coding upstream 200645 2342598 ~ 2357855 (-)
G31021 NA non-coding downstream 78560 1975704 ~ 2061961 (-)
G31074 NA non-coding downstream 259338 1870371 ~ 1881183 (-)
G31075 NA non-coding downstream 266173 1872745 ~ 1874348 (-)
G31064 klhl18,LOC107657445 non-coding downstream 288928 1849538 ~ 1851593 (-)
G31038 nrbp2,LOC108267406,LOC108413492 non-coding downstream 406934 1732585 ~ 1733587 (-)
G31137 NA non-coding upstream 34209 2176162 ~ 2176966 (-)
G31218 NA non-coding upstream 262461 2404414 ~ 2409880 (-)
G31234 NA non-coding upstream 332731 2474684 ~ 2474983 (-)
G31236 NA non-coding upstream 337985 2479938 ~ 2480415 (-)
G31244 NA non-coding upstream 351884 2493837 ~ 2494055 (-)
G31082 NA other downstream 57250 1932341 ~ 2083271 (-)
AMCG00019059 NA other downstream 244089 1882454 ~ 1896432 (-)
G31035 NA other downstream 429978 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 816925 1321614 ~ 1323596 (-)
AMCG00019031 LOC107567020,LOC106939174 other downstream 879884 1239711 ~ 1260637 (-)
G31130 NA other upstream 36027 2177980 ~ 2178650 (-)
AMCG00019109 NA other upstream 2078490 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 2790396 4932349 ~ 4940667 (-)
AMCG00019128 gorasp1,LOC103377203 other upstream 2799106 4941059 ~ 4986384 (-)
AMCG00019165 NA other upstream 4538672 6680625 ~ 6684301 (-)

Expression


Co-expression Network