AMCG00019075


Basic Information

Item Value
gene id AMCG00019075
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2280642 ~ 2291671 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019075
GGGGGCGTGTCTCTCCACAGCGCAGGCCGGAGCCGCTTCCCGCAGGAGCGCCGCGCACGCACCCGGCCCGCAGGACCCGCAGGACCCGCAGCGCCGCGGACATGGACTCCACTCCGACCATTGGGAACTTCTTCCACACACTGCGGGAGATGGGCTTCACCGAGACACAGATCCAGGCAGCGCTGCAGGCCGGACACTTCAGCGTCCCCGAGGCGGCAGAGTGgatgTTGCAGGGTGGCAGTCCGCGGCACAAGCTGGTGAAGCAGTCGCCCCCATCTGGAGGCACGGCGTTCTCAGCCTTCAACCCCCCCAAAGTCCAGGGCGGTGGCAACGCCAGAGCCGAGGGAGACGGCTCTGACCGGCAAGGTCCCAGCCCTCTGTCGTCCCCCACCGAGGCCGACACCCCGCCCCTGGGGTCCCGGATCAAGCAGGACAGGAACGGCTTCCAGGAGCTGCAGCGGGAACGCGTGGCCCAGGAGGCTCGGACCGAGAAGCAGCTCAAAAAGAAGGAGCGGGAGCTGGTGCTGAAGCGCATCGCTGACGACCGCAGGTGCCTGCAGGAGAAGAGTCAGCCCAGCAGCCAGTCAGAGCCCCCCGCCTCCGCCCCGCAGGGCCAGCGCCTGGGGGGCAAGATCCAGACCAGCGTGGACAACCACTGCGTACTCATGATCCGGCTCCCCTCAGGCGACTCGATGAGGGAGCGCTTCCCGGCTGACGCACCCTTGCGCAGCGTGGTAGAGCACATCTCCGGCCGCCACCCGTCTCTGGCCTCCTTCGCGCTGCTGCAGGGCTTTCCCAGGAAGCGCTTTGGCGAGGCGGAGCTGGCCTGCTCCCTGCGCTCCCTGGGCCTGACGCCCAACGCCGCGCTCTGCATCCAGACCACCCCCCCCGAGACCCCACCGGAGCCGCCGAGCCCCAGGCCCCTGCAGGAGGCCCCCAACGGGGTGCAGCTGCCGGGGGCCAATGAAGAGGAGGCTgcggaggaggaggcggaggaggagctGTTTCCACCTCCCATCCTGCCCTCTCCGCTCTGGGAGCAGGCAGTGGAGCATGCTGGGATACCGGGTCTGCAGCCTCCGTTCTCCGCGGTGTCCCATCGCTGGGGACGGGGGCACAAGCTGGTAgctggggaggtggaggaggggtCCAGCTCaggggaggaagaagaggaggaggaggagcagcctCTAGATGAAGAGAATGGAGATCCACAGTTGCTGTTCCCTGAACTGCCCACGAACGCAGCCCAGTCAGTCACAACCCAGGCGCTCATGGCAGCCATCTGGCTGGGTGTCTCCGAATCTCCCTCTCACCTTCTCTCGCTCTTCTCCGGTAGGGAGGGGGCCGAGGAGGCGGCGGCAGAGCCAGCTGTGGGCGCCGAGGACAGACGCGCCGTGCCAGGGGCGGCGGGGCAGGCGGCGGTGGATCGGCTGCAGAGAGCGGCGCAGCAGGACGAGCCTCCGGGGGGCACTGGGCACCCCTCGCCCCCGAAGAGGCCCTTCAGGACCCCCAGCGTGCCGTCCCTCTGCACCATGGCCACCCGTGCCACCGTCACGCTTATGACAGctcccAGTATGCAGTACAGCAGCAGTCTGTCGTGTCTGACCCCGGAGCTGGCCGAGCTGCTCCTGACCCACATGGCCCGGGAGCGGCTCCTGCGCCCGCGCACCCTGGAGCTCTTCTTCGGCTGCCCACTGCAGAAGTTCGTCCTCAACTGCTACCCGTACTCCACCAACGAGCTGCTGAGACAGCTGCGGGCCTTCACCGCCCTGAAGCAGCTCAGCCTGGTCTCCTCGCCCCTCATCACAGacGCGGGCCTCTCGGTGCTGTCCAGCCTGCAGAAGCTCCAGCATCTAAACCTGGCCGCCTGCTGCAAGCTGACCGACTCCTGCCTGCAGCACATCACAGGTCTGAAGGGCCTGTCCTACCTGTCCCTGGACCAGACCAAGGTGAGCGACTGCGGCATGGTGACGTACCTGCGTTCGGCGCCCTCTTCGCTCGCCCAGCTCAGCCTCAACCAGACCGGCGTGACTGAGGCCACCCTGGCGGCGCTGCCCCGCTGTGTGCCCCAGCTGCGGCTGCTCAGCCTCAAGCACACCAAGGTGAGCGATGTGTCGGCGCTGGCGGAGCTGCCCAGCCTGCAGACGCTGCACCTGGACGGGACGCGGGTGACCGAGGGGTCCCTGCAGCACTTGGCGGCCCACCCGTCCCTCTCCACACTCAGCCTGGCAGGCATACCGGTCGCAGATGGCAACCATGCCCTGGAGATCGTCTCCGGCCTCAGACTGACCCAGCTGACCCTGCCGGGGCGCCACTCTGTGACGGACAGCGGCCTGGTCTTCCTGTCCCACCTGGCGCTGCTGTCGGAGCTCGACCTCACGGACTACACCCACGTCACGGACCTTGGCACCGCACACCTCGCCACCATGACCAGGCTGAAGAAGCTGTCCCTCAGTAACACGCTGGTGTCGGACGCAGGGCTGCCCCCCCTGCGCGggctgcaggagctgctggagtTGTGTCTGGACCGCACGGCCGTCACCAGCCGAGGGGTGGCCACCTGCGTCTCCTGCCTGCCCCACCTGCAGGTACCTGGCCCCGTGCACCTCTACATCACATCCCTCCGTGTCCTGGGCCTGGCCAGCACGCAGGTGGGGGACTCGGTGGTGCGGCGGGGGCTCCTGCGCTGCACACAGCTGCTCAAGCTCAACCTGAGCCGCACGCGCATCACTGACCACGGTGAGGAAGAGGGCGTGGTagtggggggggaggaggaggaggaggacttCTCCAGCCTGTCCTACAGTCTGAAGTACCTGCGCCAGATGAGGCTGAGCCAGGTGAACCTGGACGGCACGGGGGTCACCCTGACGGGCATCGCCAACCTGCTCTCCTCCTGCCCCAACATCGCCAGCATCCGCGCCAGTCACACGCGGGCCCTGCTCCCCGACCAGGTCTCCGACGATGATGAAGACCAGGCCCCCTGAGCTGCGGTGGGCTGgccggggaggaggaggaggaagaggatggaaaggaggaggaggaggaggaggaggaggaggaggaggagcagctcTGAGACCTGAGTCTGAACCTTCGTTGGGCCGCCAGAGGACTGAGGTGCGAAACGGCTGTTTTTCTGAAGGCTGGACAGGAACGAGCGCGGGGGCCACGCTCGATGACACGGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019075 True 3193 mRNA 0.68 17 2280642 2291671

Neighbor

gene id symbol gene type direction distance location
AMCG00019072 NA coding upstream 91983 2177927 ~ 2188659 (+)
AMCG00019068 NA coding upstream 105835 2170076 ~ 2174807 (+)
AMCG00019061 NA coding upstream 217886 2061717 ~ 2062756 (+)
AMCG00019062 NA coding upstream 246228 2031254 ~ 2034414 (+)
AMCG00019063 NA coding upstream 250066 2017146 ~ 2030576 (+)
AMCG00019076 NA coding downstream 73935 2365606 ~ 2369242 (+)
AMCG00019081 abcf2,LOC106590172 coding downstream 84324 2375995 ~ 2378374 (+)
AMCG00019082 chpf2,LOC106590171 coding downstream 100036 2391707 ~ 2402129 (+)
AMCG00019083 NA coding downstream 195671 2487342 ~ 2488988 (+)
AMCG00019086 NA coding downstream 199827 2491498 ~ 2501639 (+)
G31141 NA non-coding upstream 71453 2188968 ~ 2209189 (+)
G31143 NA non-coding upstream 88434 2191421 ~ 2192208 (+)
G31117 NA non-coding upstream 103286 2177148 ~ 2177356 (+)
G31104 NA non-coding upstream 181490 2097181 ~ 2099152 (+)
G30943 NA non-coding upstream 197373 2038647 ~ 2083269 (+)
G31217 NA non-coding downstream 112455 2404126 ~ 2409887 (+)
G31351 NA non-coding downstream 785245 3076916 ~ 3077156 (+)
G31380 NA non-coding downstream 848016 3139687 ~ 3165672 (+)
G31430 NA non-coding downstream 1053084 3344755 ~ 3345244 (+)
G31432 NA non-coding downstream 1061669 3353340 ~ 3388685 (+)
G31110 NA other upstream 133079 2141830 ~ 2147563 (+)
AMCG00019064 NA other upstream 395091 1861829 ~ 1885551 (+)
AMCG00019046 NA other upstream 675097 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 959149 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 1026907 1253366 ~ 1253735 (+)
AMCG00019089 NA other downstream 228433 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 802781 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 898941 3190612 ~ 3210890 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 2027925 4319596 ~ 4368203 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 3639033 5930704 ~ 5939597 (+)

Expression


Co-expression Network