AMCG00019076


Basic Information

Item Value
gene id AMCG00019076
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2365606 ~ 2369242 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019076
ATGGGTTCCGAAGTCACGAGGGATTCTCAGGATTCCCAGGGTTCCGAGGGTTCCCAGGATTCCCAGGGTTCTCAAGGGTCCACGGGTTCCAAGAGCTCGGCAGTGCAGTGCCCTGAACACCCACAGGAAGCCATCCTGTACTGTCTTAACTGCAGGCGCTACCTGTGCCCTCACTCTGAGCACGTAGAGCCCAGTTACACAAGAGTTGTTGAGCGTGTTGAGGAGGAGATAGAAAAGAAGGCCAAGCTGCTGAAGTCCACCCTGAGGAAACTGGGGCAGATGGAGGTGGGGGTGTCCAGGGCGATGAATGATTTGGAGACGAAGGTGagaacagctcaggagaatgTGGCCAAGAGGTACAAGGAGCTGAGGACACTGGTGGACACGAACGAGAAGCACGCCTTCGGTCTGATCGAGGCCCAGCACCAAGCCACCATGCAACAGATGCGCCAGCTGATTGATGAGGGAGAGGAGTTTCGCCCCAGTGCCACGAGTGTTCTGGAGATCACCGAGCAGATGTTACAGAAGGACAGTAAAGCCAAACTGATGGAACTGCTTGAATTAAAAGACCGAATGGAGACACTGGAAATCAAGGCGGAGCGGCTGGGGAGGATGGTACGTTGTGACACAGCGCGTTTGGACTGTCTGGAAAGCTCCCTGGAGCAGATTGTGAAGAACACCCAGAAGTTCCTGCCTCGGCCTTGGGAGTATGCCAAGAACATCACATTCAACAAGGACAGCGCCCACGAGAACCTGAGGGTCACGGCAGACAAAACCCAGCTCCAGTACGCCTCCTCCCCGAAGAGAGTCAAGGAGACGCAGAAGCAGTCAGAGACCATCCTGGCCTCTGAGTCCTTCGACTGCGGGAAGCACTACTGGGAGGTGGATGTGAGAGACCGGGAGAGCTGGAGTGTGGGCGTGGCGTACGGCAGCAAGACGCGCAAATGCCATGACATGGCGCTGGGCATAGACAGGAAGTCCTGGGTGCTGCAGAAGAGTGACGGGGACTTCATGTCAATGCACAATGGGGAGGGCATCCTGCTGCGGGAGAGGTGCGAGCGCCTGGGCATCTTCCTGGATTGCGACAAGGGCCTCCTGACCTTCTATAGTGTGGACAAGGGCTGCTCCCTTTACTGCTTCAGAGAAAAGTTCAAAAAGCCACTGGTCCCTGCCTTCAGCATCAGCTATGAGAAGGACAGCAACTGGCCCCTGACCCTCTGTACCCTTGTCCCCAAGAATGCTCAGGCAGCGGCTAACTCTGACCAAGACAGCACCCAGAGCCCCGACTCCGACGCCGTGGGTGTGGTGGACACAGTGGAGATAGAGTCTCGCTTATAG

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019076 True 1338 mRNA 0.57 7 2365606 2369242

Neighbor

gene id symbol gene type direction distance location
AMCG00019075 NA coding upstream 73935 2280642 ~ 2291671 (+)
AMCG00019072 NA coding upstream 176947 2177927 ~ 2188659 (+)
AMCG00019068 NA coding upstream 190799 2170076 ~ 2174807 (+)
AMCG00019061 NA coding upstream 302850 2061717 ~ 2062756 (+)
AMCG00019062 NA coding upstream 331192 2031254 ~ 2034414 (+)
AMCG00019081 abcf2,LOC106590172 coding downstream 6753 2375995 ~ 2378374 (+)
AMCG00019082 chpf2,LOC106590171 coding downstream 22465 2391707 ~ 2402129 (+)
AMCG00019083 NA coding downstream 118100 2487342 ~ 2488988 (+)
AMCG00019086 NA coding downstream 122256 2491498 ~ 2501639 (+)
AMCG00019090 NA coding downstream 249993 2619235 ~ 2636403 (+)
G31141 NA non-coding upstream 156417 2188968 ~ 2209189 (+)
G31143 NA non-coding upstream 173398 2191421 ~ 2192208 (+)
G31117 NA non-coding upstream 188250 2177148 ~ 2177356 (+)
G31104 NA non-coding upstream 266454 2097181 ~ 2099152 (+)
G30943 NA non-coding upstream 282337 2038647 ~ 2083269 (+)
G31217 NA non-coding downstream 34884 2404126 ~ 2409887 (+)
G31351 NA non-coding downstream 707674 3076916 ~ 3077156 (+)
G31380 NA non-coding downstream 770445 3139687 ~ 3165672 (+)
G31430 NA non-coding downstream 975513 3344755 ~ 3345244 (+)
G31432 NA non-coding downstream 984098 3353340 ~ 3388685 (+)
G31110 NA other upstream 218043 2141830 ~ 2147563 (+)
AMCG00019064 NA other upstream 480055 1861829 ~ 1885551 (+)
AMCG00019046 NA other upstream 760061 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 1044113 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 1111871 1253366 ~ 1253735 (+)
AMCG00019089 NA other downstream 150862 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 725210 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 821370 3190612 ~ 3210890 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 1950354 4319596 ~ 4368203 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 3561462 5930704 ~ 5939597 (+)

Expression


Co-expression Network