AMCG00019078


Basic Information

Item Value
gene id AMCG00019078
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2291500 ~ 2298668 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019078
CTCCGGTTCATGTCACATGACGCTGGCCCCGCCCTCTGCAGCGTCACATGACGCGCCGGATGAGTGCGGAAGCAGCATGTCTCCGCGGCGCTTTGCTCGCTTGCTGCCGCTCTGCGCTGCCCGGCTCCGGCGCGCCGTGTCGGGGTGGCCTGCCTCCGTGACCCCGTGTCCGCAGAGCCTGGCTTCCGTGTGCAGACGCGCCTGTCGGCCGCGGAGGGAAGCGCCTGCAGCCGCTCATGTCGGAAGGTCACCCGGGGCCGGAGGGAATAGCGGCTCCAGGGGTGGCAGTGTCTGGCGGCCGAGCCTGCTGTCTCTCTGCGCGTTTTCCTTCTTCACGAAGTCGGAGGAGAGCGAGGAAGACGAGGCCAAGAAGAAGGAAGATGCCATTATTCTGCTTCTCAAGAGAGCCAAGCTGAGCATCATGCAAGGGGAGCTGGAGGATGCGGACAGGTTTCTCCACCAAGCTGCCAGGCTGGCACACCAGAGCCACAACACCCAAGCCATCACCTACACCTACAGCATGGCAGAGAAGCTCTTCAAAGCCGCCATGAGCATCATGCTGGCCGGCGGGGCTCCTGAGGATGACGATGCTGTGATTGAGATGTCTCTGAAGCTGGCCAGTATATACGCTGCTCAGAAGCAGCACGAGCTGGCTGAGCATGGGTTCGAGTTCTGCACGGAGTCGCTGGAGGCGAAGATCAAGAGGCAGAAGGAGCTCCCTGAGGGAAGTCTGCCTGAAGAGGAGCGGGCCAACACCAGGCTGCTGCTGGGCCTGTGTCTGGACTCCCACGCCCGCTACCTCACCGAGCGGCGCCGGCTGGACCAGGCCCGGCAGAACTACGTGCGCGCCCTGCAGATCTGCAGCGAGGAACAGGGAGAGGCACACCCACAGGTACCGCACGGAGGGGGGGGTGCCAATGAGACTGGGGGTCACACCGTGGTGCTGATGAACGACCTGGCGGCGCTGCTGGACCTGCAGGGCCGGTACCAGGAGGCGGAGGAGCTGGCGAGCCAGGCGCTGCAGCTGGCCCAAGAGGCGGAGCTGCCCGAGCAACACGTGCTGCTGTGCAACATGGCCGGCATCCTGATGCACCGGGGGCGGCTGGCGGAGGCGGGGCGTGTGTACAGGGAAGCGCTGGCTCTGGCCCAGGCACTGGGGGACAGCGAGAGCGTGCAGCACATCAGAGCAGGCCTGGAGGAGCTGGGGCGGCACAAGGAGGCTGGAGAGAGCGAGCAAGCCTGAGGGGAGACTGGAAGGGGGTGTGGGGTGAACGCAGCCCTGTGGTGTCGGTGCTGGGACCTGGGTggggccagagagagagagagagagagagagagagagagacagactccTCGGTGCGGTGCGGGGCGGGCCACTGCTGAGACGGGGCTGGGCGATGGGAAACTGGACTTGTACCAGCTGCCCTGTTTGCTCCCCTCCACGTCTGGATTTATCTTACAGAGGCACCGGGCGGCTGAGATGCCCAGTGGGGACAGTGGGAAGAACAGTGTGGGTGTGGAAATAAAAGTACTGTTGTGCTGAACAGCTCAAGTGCAGCGTCTGTCCTGTTCCTCCTGTCTGCATATTGGGTgttagaagagagagagagtgtgtgtgtgtgtgtggtacatGCACAAACCTTTTTGCATCCTGTTTTATACACAATAAACGGGCACTGGGCtgtggaaatgtaatttatttttattctgagaTTGTACAGGGTTTGCTCAGTGGGGAGAGCACGCTCCCACCTCCACTGTCCAGTTTGAAAAATAGATACAGTATTCTATACATTCCCAACAAAGCAAAGCAGACCAGGctctatatatagatttatctatctatctgtgcTGGGTTAAGGTTCGTTAGTTTTCTTCTGGTAAAGTCAAGGTCACGCCTTTCAAACAACACCCTAAGAAATGATGCATTTGCGATGTGAGAAACGCAAGCCACCCTGCCGTTCGACGGCAGTTTGTGTTGTCTGAGGCAGCCAGCCCCTCTTTAGGTCTCCTTTCCTTGGCCCAATGGGGGGggaacattaaattaaactattaaatcaGCCTAATGCGATCGAGTCTCTCGTGAGAGGTGCACGTACGCACGTCCCACAGCACCTGCCTCAACGACGCCACGTTTCCACCCCTCGCTGCAAAACGCTGCGGCtaatgcatgcaaataaaagGGGCACCCTCTAAAAACCACAGGAGGCCAAACAGAACCACCATCAAATAACACCCTGAAATTATGCCAATCCAGTTCACGAAGGCTTCAGTTAGAGATAAATGACTGGATCCACCCAAGCCACATGAGCACCCCTCTCTGTCATGGAATCCAAgtataaatcaaacaaaacgaGAAAAGGTGAAAACGAGCTCAGGCTGGGTTTGCCTTGGTGCTGTTTTATGGGTGTAATTGGGTTGTTCTAAAGGGGTACGGAGCCCAGGATCGGCACTGTGGGGACGTCgccacacagcagcacagtccTGCACCGCTCCACTCTTACACCGTTAGACCAGCAGAGCGAAGGGAACGATTCTGGAATGATGCCCGAGAGGGACAACACAGAACAGACTTGGGACAACAATCCGCCTCTCCAAGCATTCCAGTGACACACGAGCTCAAACATTTCTTTCCTTTGACTAAACTTTCTCTCCCCCCGATGTGCGCGTGGCTCTCGGTGTGCCGTCTCGGCCGAGCGGACCTCAGTGTGCCGTCGAGGAGAGAGACGGACGAGGTGCAGACGCGAGGGAAAGGACAGGAGGGCAACGGATTGAGTCCTGCAAACACGAAGGGACAAGAAATCAAGcagtaaagaaaaaagacaagggGAGAGGGTTTATCCTTTTACACTCTGACCTGAGGGGGAAATaatctttaaaagaaagaaaactcaCTGGGAACCCAGAACACAATCGAAGGAAAGCGGGGCCTGTTCCCAGCGCACCAATAACCGGGCTGGCTGGGTTTTGGCAGCAGCTCACGATCATGCTTTTCTAAGCTAGGCGTGCATCTCTGGGGGTCACCCAGGGGCCCCGTGTCATCGAGCGTGGCCCCCGCGCTCGTTCCTGTCCAGCCTTCAGAAAAACAGCCGTTTCGCACCTCAGTCCTGTGACAGACAGACGGGACGGGCGAGTCCCCTCTCTGGCGGCCCAACGAAGGTTCAGACTCAGGTCTCAgagctgctcctcctcctcctcctcc

Function

GO:

id name namespace
GO:0034551 mitochondrial respiratory chain complex III assembly biological_process
GO:0005743 mitochondrial inner membrane cellular_component

KEGG:

id description
K18169 TTC19; tetratricopeptide repeat protein 19, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019078 True 3202 mRNA 0.58 10 2291500 2298668

Neighbor

gene id symbol gene type direction distance location
AMCG00019073 NA coding downstream 56983 2208790 ~ 2234517 (-)
AMCG00019074 ubtfl,LOC107718032 coding downstream 87648 2191396 ~ 2203852 (-)
AMCG00019071 NA coding downstream 149547 2140521 ~ 2141953 (-)
AMCG00019069 NA coding downstream 192691 2096984 ~ 2098809 (-)
AMCG00019070 NA coding downstream 242416 2038699 ~ 2049084 (-)
AMCG00019080 NA coding upstream 5202 2303870 ~ 2312400 (-)
AMCG00019079 NA coding upstream 43930 2342598 ~ 2357855 (-)
AMCG00019077 abcf2 coding upstream 81869 2380537 ~ 2387149 (-)
AMCG00019084 smarcd3,LOC106578675 coding upstream 111272 2409940 ~ 2434075 (-)
AMCG00019085 NA coding upstream 172796 2471464 ~ 2484739 (-)
G31137 NA non-coding downstream 114534 2176162 ~ 2176966 (-)
G31021 NA non-coding downstream 229539 1975704 ~ 2061961 (-)
G31074 NA non-coding downstream 410317 1870371 ~ 1881183 (-)
G31075 NA non-coding downstream 417152 1872745 ~ 1874348 (-)
G31064 klhl18,LOC107657445 non-coding downstream 439907 1849538 ~ 1851593 (-)
G31218 NA non-coding upstream 105746 2404414 ~ 2409880 (-)
G31234 NA non-coding upstream 176016 2474684 ~ 2474983 (-)
G31236 NA non-coding upstream 181270 2479938 ~ 2480415 (-)
G31244 NA non-coding upstream 195169 2493837 ~ 2494055 (-)
G31245 NA non-coding upstream 196048 2494716 ~ 2496567 (-)
G31130 NA other downstream 112850 2177980 ~ 2178650 (-)
G31082 NA other downstream 208229 1932341 ~ 2083271 (-)
AMCG00019059 NA other downstream 395068 1882454 ~ 1896432 (-)
G31035 NA other downstream 580957 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 967904 1321614 ~ 1323596 (-)
AMCG00019109 NA other upstream 1921775 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 2633681 4932349 ~ 4940667 (-)
AMCG00019128 gorasp1,LOC103377203 other upstream 2642391 4941059 ~ 4986384 (-)
AMCG00019165 NA other upstream 4381957 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 6548483 8847151 ~ 8901878 (-)

Expression


Co-expression Network