AMCG00019083


Basic Information

Item Value
gene id AMCG00019083
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2487342 ~ 2488988 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019083
ATGCCCAATGGACCAACGACAATGAGACAAGCTCCACCCAAGTACAAGGAGGATGTGACTGAGGTTTACATTATTAACACCCTCCCAGACCTTCGTGTTACTCTGGAGGGCATGGCTGTGTCTCGGTTCCTCAGTCAAACCACCGCTGACTTTGTGAAAATCACTGTCTTACAGGTGAAATTGGGGAAGTATTCACCAGAACTTGAACGTAATCCAAGAATGGAGAATCTGATAAAAAAGTTCAATACACGGCTGGAGGAAATACAGAAGCAGATCGACGAGAGATCGCGTAATCAGGACTTCCCTTATGAGTACATGTACTCCGGCCACATAGAAAACAGCATCACCATCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019083 True 354 mRNA 0.46 2 2487342 2488988

Neighbor

gene id symbol gene type direction distance location
AMCG00019082 chpf2,LOC106590171 coding upstream 85213 2391707 ~ 2402129 (+)
AMCG00019081 abcf2,LOC106590172 coding upstream 108968 2375995 ~ 2378374 (+)
AMCG00019076 NA coding upstream 118100 2365606 ~ 2369242 (+)
AMCG00019075 NA coding upstream 195671 2280642 ~ 2291671 (+)
AMCG00019072 NA coding upstream 298683 2177927 ~ 2188659 (+)
AMCG00019086 NA coding downstream 2510 2491498 ~ 2501639 (+)
AMCG00019090 NA coding downstream 130247 2619235 ~ 2636403 (+)
AMCG00019088 NA coding downstream 169565 2658553 ~ 2665864 (+)
AMCG00019095 wnt9a,LOC106599874 coding downstream 356392 2845380 ~ 2850000 (+)
AMCG00019101 ccny,LOC107739127,LOC107588043,LOC108431590 coding downstream 768673 3257661 ~ 3275357 (+)
G31217 NA non-coding upstream 77455 2404126 ~ 2409887 (+)
G31141 NA non-coding upstream 278153 2188968 ~ 2209189 (+)
G31143 NA non-coding upstream 295134 2191421 ~ 2192208 (+)
G31117 NA non-coding upstream 309986 2177148 ~ 2177356 (+)
G31104 NA non-coding upstream 388190 2097181 ~ 2099152 (+)
G31351 NA non-coding downstream 587928 3076916 ~ 3077156 (+)
G31380 NA non-coding downstream 650699 3139687 ~ 3165672 (+)
G31430 NA non-coding downstream 855767 3344755 ~ 3345244 (+)
G31432 NA non-coding downstream 864352 3353340 ~ 3388685 (+)
G31461 NA non-coding downstream 1375201 3864189 ~ 3864604 (+)
G31110 NA other upstream 339779 2141830 ~ 2147563 (+)
AMCG00019064 NA other upstream 601791 1861829 ~ 1885551 (+)
AMCG00019046 NA other upstream 881797 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 1165849 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 1233607 1253366 ~ 1253735 (+)
AMCG00019089 NA other downstream 31116 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 605464 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 701624 3190612 ~ 3210890 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 1830608 4319596 ~ 4368203 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 3441716 5930704 ~ 5939597 (+)

Expression


Co-expression Network