AMCG00019085


Basic Information

Item Value
gene id AMCG00019085
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2471464 ~ 2484739 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019085
TTGAAACAGAAACCGGCTGCAGACAACCCAGTCTTCACTCCTAAAGACCAAGAAGCCTGGCTTCTAGCCAAGATCTGGGTCCGAAATGCAGACTTCTATGTCCATGAGTTGTGCTCACACCTCCTACAAACACATCTGATCTGTGAAGTCTTCTTCATGGAGGTTTACAGTTCTATGGCTGACAAGCACCCAATACTGAAGTATACAGCCATTAGCGAAAGCGGTCTGTGGGAAGTGTTAAAGAGATGCACAGAGGTGATGACCTATGAATCGCTCTGCCTGCCGGACAACCTGAAGAAGCGTGGCGTGGAGAACCTGAAGGACTATTACTACAAGGAGGACGGGCTAAAGATCTGGAATGCGATCTATGAGTTTGTTCAAGCGGTGGTGCTCAAGTATTATAAATCTGATGAGAATATTCAGAAAGACCCTGAACTTAAGAGCCTTGTCAATAACATCTACTTGTATGGATTTCTAATGAAAGAAGTGCCTGCCCGCTGCACTGACAAGTCCCCCGTGTCCGCACGTCTGGATCTGGACGAGGAGCTCCAGCAGCTGTTAGAATCTAAGATGCCCGTGTCCGAGGGTAATTTGGCGACGCTCCCTCCGGACCCGCCGCTGTGTGGATCCCGGCCGCGCCTGCGCCGCCGCCTCCCCGCACCGAGCCTCGCCAGAGCCGGCTGCATCCCTGAGACTCAGCCCCTTCCAGGCACCAGCCGTCCATCTGGCCGCAAACAGCCCGGGGGGAGTGCGGGAGAAGCGCAGTCTGGAGCCGCAAGGAAGTTCACAACTAGAGCGCCGGACAGGGACTCGTCTcggtgttattattaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019085 True 831 mRNA 0.53 5 2471464 2484739

Neighbor

gene id symbol gene type direction distance location
AMCG00019084 smarcd3,LOC106578675 coding downstream 37389 2409940 ~ 2434075 (-)
AMCG00019077 abcf2 coding downstream 84315 2380537 ~ 2387149 (-)
AMCG00019079 NA coding downstream 113609 2342598 ~ 2357855 (-)
AMCG00019080 NA coding downstream 159064 2303870 ~ 2312400 (-)
AMCG00019078 NA coding downstream 172796 2291500 ~ 2298668 (-)
AMCG00019087 NA coding upstream 36174 2520913 ~ 2525129 (-)
AMCG00019092 NA coding upstream 153761 2638500 ~ 2657544 (-)
AMCG00019091 arf1,arf3,LOC103038497,LOC102781726,LOC107671731 coding upstream 191576 2676315 ~ 2686173 (-)
AMCG00019093 wnt3a,LOC107661901 coding upstream 273361 2758100 ~ 2759745 (-)
AMCG00019094 wnt3a coding upstream 284041 2768780 ~ 2785358 (-)
G31218 NA non-coding downstream 61584 2404414 ~ 2409880 (-)
G31137 NA non-coding downstream 294498 2176162 ~ 2176966 (-)
G31021 NA non-coding downstream 409503 1975704 ~ 2061961 (-)
G31074 NA non-coding downstream 590281 1870371 ~ 1881183 (-)
G31244 NA non-coding upstream 9098 2493837 ~ 2494055 (-)
G31245 NA non-coding upstream 9977 2494716 ~ 2496567 (-)
G31246 NA non-coding upstream 15394 2500133 ~ 2509194 (-)
G31296 NA non-coding upstream 76736 2561475 ~ 2562794 (-)
G31300 NA non-coding upstream 82062 2566801 ~ 2571288 (-)
G31130 NA other downstream 292814 2177980 ~ 2178650 (-)
G31082 NA other downstream 388193 1932341 ~ 2083271 (-)
AMCG00019059 NA other downstream 575032 1882454 ~ 1896432 (-)
G31035 NA other downstream 760921 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 1147868 1321614 ~ 1323596 (-)
AMCG00019109 NA other upstream 1735704 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 2447610 4932349 ~ 4940667 (-)
AMCG00019128 gorasp1,LOC103377203 other upstream 2456320 4941059 ~ 4986384 (-)
AMCG00019165 NA other upstream 4195886 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 6362412 8847151 ~ 8901878 (-)

Expression


Co-expression Network