AMCG00019092


Basic Information

Item Value
gene id AMCG00019092
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2638500 ~ 2657544 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019092
ATGGCGACGTGTTCCCTGTCGTCCCGCCGTGATGACGTAGCAGCGCAGCCTGTGAGTGATGGCTCTCCTGCGGGAGGACGGCTAGTGAGCGGCGGGCCGGCGGGGCACACGGCACATGTATCTCAGGGTTTTCTCCAGACTGCTGTCCGCCGAGGGGGGTGCAGTGAGGAGACCTGTCCTGTGTACGCTCCAGGGCTGTATCTCGCCCCCGGCCTGTGCGCTGCAGCAGATGAGCAGATGTCTGGGCTGCACAGTTTCCATTGGCTGGCGCTGAAGAGGAGTGCAATGGCAGGACCAAGACCTGTGGTGCTGAGTGGGCCGTCCGGCGCTGGGAAGAGCACCCTCCTCAAGCGCCTTCTCAAGGAGTACGAGGGCGTCTTCGGCTTCAGTGTCTCACATACGACAAGAAACCCCCGCCCTGGAGAGGAAAACGGCAAAGAGATCCCCTTCTGCCGTAAAGAAGGTTGTGAGGTCTGCCTGAAGGCCGAGCTACCCCTGGCCTTCACCCCCTCCATCAGCTGGCAGCCAAGGACAGGCGATTACCATTATGTGACCAGGGAGGTGATGCAGAGGAGGATAGAGGCTGGAGAATTCATTGAGAACGCGGAGTTCTCCGGGAACATGTACGGGACCAGCAAAGCATCGGTGCAGGACGTCCAGGCCAAGAACCTTATCTGCATCCTGGACATCGACATGCAGGGCGTGAGGAACATCAAGCAGACCGACCTCAACCCCATCTATGTGTCCATCCAGCCGCCCTCCATGGCCATTCTGGAAAAGAGGCTACGAGACCGACAGACCGAGACCGAGGAGAGCTTACAGAAGCGCTTGGCTGCAGCTCAGGCCGACATGGAGATCAgcaaTGAACCTGGTCTGTTTGATGTTGTAATTGTTAACGACGACCTGGAAGAAGCTTATGGGAAATTAAAAGGCGTTCTCATTGAGGAAATCGAGAAAGTCCAGGAAGCCAAGAAGTCGTAGAAGGGGAACCCCGGCGCAGTCTGCCTCGCAGGGACCTCCTGACACAACACCGGCCTTCCTCTGCGGTTCCCATCATTCCCTCTGCTGGAGCACTAACCAGAACCAGCAGCCCACCGGTTGCGTTTTAACTGCAGATTTTACCTTAGGAGTCCCCAGGTAGATTTTTAACATGTTTGTGAAAGTGAAGatactttaatattttctaggtttacatgtatataattagaaggccattttatctttttttcctgtACCTGGTGGTTAATAAccccacacttttttttatatttaaattatatacttCTGAATTTCCTGTACAGTACAATGCATTCGAGCTCTGTGCTGCCAGAGACTGTAATTGTCGCCGGACTGTTTCCTTGCCTCGGCCGAGTGTCGTCATTAAAGCAGGGCAGCGTTAACAATCAATTATCTCGTGTACGGACACAGAAAACATATTGAACGAAGACGTATCCTTATGCATGGATCTGTGAGACTTCGCTCATTCCAGTAAtgctgtggggggggtgtaGGTGGCGAACGCACTCAGAAGTGCGTCCGGGGCAGCTGGCGGTGGCTGGCAGACGTTTTTTCTTTCCGTTGGCATGTGGAGCATTCGTTGAGGTTATCCATCTATAATTATTCCACAAGCCACCCAACTGCATGCATCCATTTTCTGTCTTGCCTTTCCGAGTTGCCTGCGGACACTTGGCCGATCGGTCTGACTGCCAGGATAGTTCGCGGCACTGCGGTGATGCTGCTCGGGTTGTCTCTGTACCGGGAGCGTGGGCATCCCCTGACTGAGGAGAGACGCTCTTCTGTCACCTCAGGAATTGGCTCGTAcgtgtgcatttaaaataaatccataataCATTGCTGTTTGGGCGCTGCAGCTGGAACAGTGCACTCTTGCGCTAACGTTTGCCAGCTCAGCGCATGTCATGTCAGGGAATGTCTTCTCAATCACTTCCATTCCAGAAGCTTTTTAAAATCGATACAGTTCCATCCCGACTTCCGTCTGAGGGTCACAGCCATTGTCACACCCCAGCCAACGATGTCCTTCATCGCTTGGCCTCACAGTCACTCGAGATCTGTCCTCCAAACCTGAACACACGGACGGTACCAGAAACTACCAGAGCCGCAGCGGGGATTTAGATTCAGGCCGGCGTCCATGAGTGGCAGAGGAAGGAACAAATCGGTCGTTTCGGAGTCCTCTGTAATCAAGAGACTTTGGAAATCTGGGTCAGCTAACCCGGGTGTTTTGTATTCTTCGAGGCCATATATCTGTATTGTAGCCAAGGCATCCCCAGCTAAGAAGCCAAGGTGGCTTTCTAGTCTGATTATCTGCGTCTGGCATAGGGGTACATTGTAGGTTGATCTTTCTGGGCTCAATACTTTGACAGTGTGACGTACATTTATAAATCCATATACCTGACCCACACATCGGATAAGCAATCCACTTCTCACACAGCATCTAACGTGctataaacacaaatatcatggctatatgtatgtttatacagATGTAAcctgtaatgtactgtaatatgTTATAGAGTGGCCCTTATATCTTGTAGAGAGCATTGAGgatgtttaattaacaaaaaaggtaaaaacagGGGTGGAAAGTGTACAAAAAATAGAATCTGAAAAAAAAGATCTGATGATGTAAATATACGTACTGCTGCTTGCATGCACAGTCCACACATTCGAGAACTTCCTGGAGTCGTTTTTAAGATGATTGGATTCGGCcatctctttgtttttgttttttgtttttttaattatctgagTTTTGATATTTCTAGGTGGTAAAGTTGCCgaattttatattgtatgtgttgttttatatattttttaaaaaagacagcagtttgtgtttgttttgtgaggAGCCCTGGTTAGTTTACGATGAGCGCCGATCTCCGATGTCAATGTCTTACTCTGAGGTCGACTGGACGACCTGGACGGCGTAATAATGCAAAGAGTGTCACAGAGAGGGCGGTTCTGTGGAAAGGAGTTCctgaattaatacaaaaaaaaatcatgtaaCTAGGAATTTTAAAGGAATAAGTACACTTAACCATCCACACTTACTTGAAATGCGCTATTGGTTCAGTAGTAAAACTGAAATCTCTTCCACCAGCGTCTGTATGAcgagtgtgtgtttctgtgcaacGTGTCCTGTATGCTGCTGTGCTATCTGAATAAATCCCACGTGAGACACTCCATACA

Function

GO:

id name namespace
GO:0006163 purine nucleotide metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0004385 guanylate kinase activity molecular_function

KEGG:

id description
K00942 E2.7.4.8, gmk; guanylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019092 True 3213 mRNA 0.49 10 2638500 2657544

Neighbor

gene id symbol gene type direction distance location
AMCG00019087 NA coding downstream 113371 2520913 ~ 2525129 (-)
AMCG00019085 NA coding downstream 153761 2471464 ~ 2484739 (-)
AMCG00019084 smarcd3,LOC106578675 coding downstream 204425 2409940 ~ 2434075 (-)
AMCG00019077 abcf2 coding downstream 251351 2380537 ~ 2387149 (-)
AMCG00019079 NA coding downstream 280645 2342598 ~ 2357855 (-)
AMCG00019091 arf1,arf3,LOC103038497,LOC102781726,LOC107671731 coding upstream 18771 2676315 ~ 2686173 (-)
AMCG00019093 wnt3a,LOC107661901 coding upstream 100556 2758100 ~ 2759745 (-)
AMCG00019094 wnt3a coding upstream 111236 2768780 ~ 2785358 (-)
AMCG00019097 NA coding upstream 420346 3077890 ~ 3094196 (-)
AMCG00019098 NA coding upstream 493286 3150830 ~ 3168130 (-)
G31329 NA non-coding downstream 380 2635184 ~ 2638120 (-)
G31300 NA non-coding downstream 67212 2566801 ~ 2571288 (-)
G31296 NA non-coding downstream 75706 2561475 ~ 2562794 (-)
G31246 NA non-coding downstream 129306 2500133 ~ 2509194 (-)
G31245 NA non-coding downstream 141933 2494716 ~ 2496567 (-)
G31346 NA non-coding upstream 196904 2854448 ~ 2856659 (-)
G31363 jmjd4,LOC107727496,LOC107661892 non-coding upstream 439165 3096709 ~ 3097340 (-)
G31390 NA non-coding upstream 531183 3188727 ~ 3190187 (-)
G31399 NA non-coding upstream 553860 3211404 ~ 3211605 (-)
G31431 NA non-coding upstream 687313 3344857 ~ 3345240 (-)
G31130 NA other downstream 459850 2177980 ~ 2178650 (-)
G31082 NA other downstream 555229 1932341 ~ 2083271 (-)
AMCG00019059 NA other downstream 742068 1882454 ~ 1896432 (-)
G31035 NA other downstream 927957 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 1314904 1321614 ~ 1323596 (-)
AMCG00019109 NA other upstream 1562899 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 2274805 4932349 ~ 4940667 (-)
AMCG00019128 gorasp1,LOC103377203 other upstream 2283515 4941059 ~ 4986384 (-)
AMCG00019165 NA other upstream 4023081 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 6189607 8847151 ~ 8901878 (-)

Expression


Co-expression Network