AMCG00019099


Basic Information

Item Value
gene id AMCG00019099
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 3282160 ~ 3285119 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019099
ATGGGGCGATGGGACGCTCTGGATTTGATCTTCCTCACTCTCAACCGCAACATCACAATAGTAGGAAAGATCTGGTTAACCCTCATCCTCTTGCTGCGGCTCCTCTTTCTCCTGCTGGCTGGATATCCTCTGTACCAGGACGAGCAGGAGAGATTCGTCTGCAACACCATCCAGCCCGGCTGCTCCAACGTGTGCTACGACGTTTTCTCCCCTCTTTCCCACTTCAGATTCTGGGTGGTTCAGCTGATCGCCCTCTGTCTGCTGTATGTGATATTTGTTGTCTATGTGATCCACAAAGTAGCGGCAGCTGCCACCGATGAAAGCTGTGCTTCAAACCGAGCGACAGCCTCCTCCCTTTGTAAAATACATCAGGAACCAATCAGGAATGCCCCCAAGACTGCTTTTGAGGCCAAGCTACAGAAGATCCCCAACTTCTCAGGTGCTTACATCTTCCACTTGCTGCTGAGGATCATATTTGAAGCCGGCTTTGGTGCTGGTCAGTACTACCTATTTGGGTTTCTCATTCCAAAGAGATTCCTCTGCTATGAGACGCCGTGTACTAGCATGGTTGATTGCTATATCTCCAGACCCACGGAGAAGACCTTGATGCTCAATTTCATGTTCGGGGTCAGCGCCTGGTCTTTCTTGCTGAACATTGCTGACTTGATCTGTGTGATCAAGAGGTCTCTGAGGCAAAAGCGGCGGGATAAAGTGCTGATGGAGAAAATGTATGAGGAAGAGGAGTACTACCTCTCTCCGGCCAGCATAAACGTAGACTCGTGTGCCTCCGCTGCTTTCCACAAAAGGAGGAACAGTAAAGCCAGTGCAGACGAGGCAACGTCCATGCGCTTGGACGAGGCGGATCGGTTATCGACGCGCTCTGATGTTCTGTCCCCACACAGCGCTGAGTCCAACACGAACGGGAACAATGTCTACACCCAGGCCCAAGAGGAGCAGGTCGACCGGGAAGGCAGTGAAGTCGCTCTTTGCTTGAGTGAGTCGGCGGCGACGCCACGCCTGACCGGCAAATACTACAAACACAGATGCCTGAGAGCGCAGACGTCCTTGCTACGGGAAAAAGTCCCAGCAGGGGAAACGGAAGCCTCCGCGGGACTGTGTAGCAGGAGGATAGGGCAGTACACACTCGTGGAAATGACCGACCCCGATTTAAAGTCGAACTGTAGTGAGACTCGAGAGCGGAGATCCGAGTGGGTGTGA

Function

GO: NA

KEGG:

id description
K07630 GJD4; gap junction delta-4 protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019099 True 1218 mRNA 0.53 2 3282160 3285119

Neighbor

gene id symbol gene type direction distance location
AMCG00019101 ccny,LOC107739127,LOC107588043,LOC108431590 coding upstream 6803 3257661 ~ 3275357 (+)
AMCG00019095 wnt9a,LOC106599874 coding upstream 432160 2845380 ~ 2850000 (+)
AMCG00019088 NA coding upstream 616296 2658553 ~ 2665864 (+)
AMCG00019090 NA coding upstream 645757 2619235 ~ 2636403 (+)
AMCG00019086 NA coding upstream 780521 2491498 ~ 2501639 (+)
AMCG00019104 LOC107588097 coding downstream 346616 3631735 ~ 3635688 (+)
AMCG00019107 NA coding downstream 963274 4248393 ~ 4249743 (+)
AMCG00019106 NA coding downstream 983132 4268251 ~ 4282752 (+)
AMCG00019113 rheb,LOC106579659 coding downstream 1124864 4409983 ~ 4423443 (+)
AMCG00019114 crygn,LOC102796340 coding downstream 1145777 4430896 ~ 4433550 (+)
G31380 NA non-coding upstream 116488 3139687 ~ 3165672 (+)
G31351 NA non-coding upstream 205004 3076916 ~ 3077156 (+)
G31217 NA non-coding upstream 872273 2404126 ~ 2409887 (+)
G31141 NA non-coding upstream 1072971 2188968 ~ 2209189 (+)
G31430 NA non-coding downstream 59636 3344755 ~ 3345244 (+)
G31432 NA non-coding downstream 68221 3353340 ~ 3388685 (+)
G31461 NA non-coding downstream 579070 3864189 ~ 3864604 (+)
G31566 NA non-coding downstream 1462429 4747548 ~ 4747749 (+)
G31622 NA non-coding downstream 1687853 4972972 ~ 5030095 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 71270 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 181989 3094452 ~ 3100171 (+)
AMCG00019089 NA other upstream 664108 2520104 ~ 2618052 (+)
G31110 NA other upstream 1134597 2141830 ~ 2147563 (+)
AMCG00019064 NA other upstream 1396609 1861829 ~ 1885551 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 1034477 4319596 ~ 4368203 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 2645585 5930704 ~ 5939597 (+)
G32005 NA other downstream 4135382 7420501 ~ 7421083 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 5060336 8345455 ~ 8384592 (+)
G32286 NA other downstream 5976255 9261374 ~ 9539211 (+)

Expression


Co-expression Network