Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019103 |
| gene name | fzd8,fzd8a,LOC106578536,LOC102789550 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 3298338 ~ 3300086 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| fzd8a | Predicted to enable Wnt-activated receptor activity and Wnt-protein binding activity. Acts upstream of or within canonical Wnt signaling pathway; eye field cell fate commitment involved in camera-type eye formation; and neurogenesis. Predicted to be located in membrane. Predicted to be active in plasma membrane. Predicted to be integral component of membrane. Is expressed in several structures, including digestive system; mesoderm; nervous system; neural keel; and pectoral fin. Orthologous to human FZD8 (frizzled class receptor 8). |
| fzd8 | Enables PDZ domain binding activity; Wnt-activated receptor activity; and ubiquitin protein ligase binding activity. Involved in canonical Wnt signaling pathway. Predicted to be located in Golgi apparatus. Predicted to be part of Wnt-Frizzled-LRP5/6 complex. Predicted to be active in plasma membrane. Predicted to be integral component of membrane. |
| description |
|---|
| PREDICTED: frizzled-8 |
| id | name | namespace |
|---|---|---|
| GO:0060070 | canonical Wnt signaling pathway | biological_process |
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0021529 | spinal cord oligodendrocyte cell differentiation | biological_process |
| GO:0008406 | gonad development | biological_process |
| GO:0021531 | spinal cord radial glial cell differentiation | biological_process |
| GO:0060898 | eye field cell fate commitment involved in camera-type eye formation | biological_process |
| GO:0021879 | forebrain neuron differentiation | biological_process |
| GO:0007409 | axonogenesis | biological_process |
| GO:0033077 | T cell differentiation in thymus | biological_process |
| GO:0001944 | vasculature development | biological_process |
| GO:0042995 | cell projection | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0030165 | PDZ domain binding | molecular_function |
| GO:0042813 | Wnt-activated receptor activity | molecular_function |
| GO:0017147 | Wnt-protein binding | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| id | description |
|---|---|
| K02375 | FZD5_8, fz2; frizzled 5/8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019103 | True | 1749 | mRNA | 0.64 | 1 | 3298338 | 3300086 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019102 | NA | coding | downstream | 124902 | 3171748 ~ 3173436 (-) |
| AMCG00019098 | NA | coding | downstream | 130208 | 3150830 ~ 3168130 (-) |
| AMCG00019097 | NA | coding | downstream | 204142 | 3077890 ~ 3094196 (-) |
| AMCG00019094 | wnt3a | coding | downstream | 512980 | 2768780 ~ 2785358 (-) |
| AMCG00019093 | wnt3a,LOC107661901 | coding | downstream | 538593 | 2758100 ~ 2759745 (-) |
| AMCG00019105 | NA | coding | upstream | 578610 | 3878696 ~ 4065944 (-) |
| AMCG00019110 | NA | coding | upstream | 875389 | 4175475 ~ 4176838 (-) |
| AMCG00019108 | NA | coding | upstream | 885654 | 4185740 ~ 4207481 (-) |
| AMCG00019112 | NA | coding | upstream | 1069061 | 4369147 ~ 4383176 (-) |
| AMCG00019117 | NA | coding | upstream | 1157374 | 4457460 ~ 4468048 (-) |
| G31399 | NA | non-coding | downstream | 86733 | 3211404 ~ 3211605 (-) |
| G31390 | NA | non-coding | downstream | 108151 | 3188727 ~ 3190187 (-) |
| G31363 | jmjd4,LOC107727496,LOC107661892 | non-coding | downstream | 200998 | 3096709 ~ 3097340 (-) |
| G31346 | NA | non-coding | downstream | 441679 | 2854448 ~ 2856659 (-) |
| G31329 | NA | non-coding | downstream | 660218 | 2635184 ~ 2638120 (-) |
| G31431 | NA | non-coding | upstream | 44771 | 3344857 ~ 3345240 (-) |
| G31444 | NA | non-coding | upstream | 302314 | 3602400 ~ 3602611 (-) |
| G31454 | NA | non-coding | upstream | 333770 | 3633856 ~ 3638241 (-) |
| G31470 | NA | non-coding | upstream | 635814 | 3935900 ~ 3936123 (-) |
| G31471 | NA | non-coding | upstream | 695802 | 3995888 ~ 3996123 (-) |
| G31130 | NA | other | downstream | 1119688 | 2177980 ~ 2178650 (-) |
| G31082 | NA | other | downstream | 1215067 | 1932341 ~ 2083271 (-) |
| AMCG00019059 | NA | other | downstream | 1401906 | 1882454 ~ 1896432 (-) |
| G31035 | NA | other | downstream | 1587795 | 1705899 ~ 1710543 (-) |
| AMCG00019034 | NA | other | downstream | 1974742 | 1321614 ~ 1323596 (-) |
| AMCG00019109 | NA | other | upstream | 920357 | 4220443 ~ 4229991 (-) |
| AMCG00019129 | NA | other | upstream | 1632263 | 4932349 ~ 4940667 (-) |
| AMCG00019128 | gorasp1,LOC103377203 | other | upstream | 1640973 | 4941059 ~ 4986384 (-) |
| AMCG00019165 | NA | other | upstream | 3380539 | 6680625 ~ 6684301 (-) |
| AMCG00019209 | LOC106600477 | other | upstream | 5547065 | 8847151 ~ 8901878 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_023251 | fzd8a | coding | NC_007135.7 | CM002908.2 | 4447635 ~ 4450238 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000070_01822353_01824092 | FZD8A, FZD8, FZD8.S, FZD8.L | coding | CI01000070 | null | 1822220 ~ 1824599 (+) |
