AMCG00019107


Basic Information

Item Value
gene id AMCG00019107
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 4248393 ~ 4249743 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019107
ATGCTGAAGATGAAGCTGCCCATGAGAGCGGCGGAGGAAGGCGGAGACGACACGGCCGAGGACGAGCAGCCACAACCCGACCGCCACCCCCTCTTCCCCGGCTCGGACTGCCTGAGCAAGGAGGCGGTGTTCGAGTGGTTCGGCCTGTGCCTGAGCCCGGCCGAGCGCGTCGAGCTGATGTGCGGGCTGCTGCACATGTGCCAGCCGCTGGAGCTGCGCTTTCTGGGCTCCTGCCTGGAGGACCTGGCGCGGAAGGACTTCCACATCCTCCGGGACTCCGAGATCAGGGCGAACAGCCCGGCCGAGCTGGAGCTGCTGACGGACGTCGCCGACCCGGTGGTGCGGTCCAAGCTGCTGGTGTGCCTGTCGCTCCTGGGCTCGGAGAACAGGGAAGCCGCGGGGAGGCTCTTCGCCATCCTGAGGCGGGTGGACGCAGCCCTGTACTTCAAAAACTGCGGCTTCCCCGTCTCCGCGTACCCGGACCCCCGGCCCCTCCAAGTCCACCCTCCGTGTGAGGACGCAGAGGAGGCGGGCAGAGCGGGGCCGGGTTGCGGGCCGCCGTCGGAGGCAGGGGCCGGTCCTCTGGAGCAGCTGGCGCTGCTGTTCACCATGGCCTCCCTGCACCCGGCCTTCCCCTTCCACCAGAGAGAGACGGTCCGGGTCCAGCTGGAGAAAGTGGAGCCGGCGATCCAGGACGAGAGGCGGCGGTACCGACACGCCAGCAGCGCCCTGCACGGGTGCGGGGTGCGGGGTGCGGGGCTGTGGGAGCCGGTTCAGGGCGCACTGGAGGCGCTGCAGCGCTGGGTGGCCCGGCCTCGCTGCCCTTTGATTGACAGCTGGGCAGGGAAAGCGGGCGCTGTGACGTGTAATGTGTGCGCCGCCGCCGGGGGCCAGTGCTGCTCGGGGTCCGGGCGTGGGCGGCTGGGCCGGGGTGGGCCGCCTGTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019107 True 948 mRNA 0.71 2 4248393 4249743

Neighbor

gene id symbol gene type direction distance location
AMCG00019104 LOC107588097 coding upstream 612705 3631735 ~ 3635688 (+)
AMCG00019099 NA coding upstream 963274 3282160 ~ 3285119 (+)
AMCG00019101 ccny,LOC107739127,LOC107588043,LOC108431590 coding upstream 973036 3257661 ~ 3275357 (+)
AMCG00019095 wnt9a,LOC106599874 coding upstream 1398393 2845380 ~ 2850000 (+)
AMCG00019088 NA coding upstream 1582529 2658553 ~ 2665864 (+)
AMCG00019106 NA coding downstream 18508 4268251 ~ 4282752 (+)
AMCG00019113 rheb,LOC106579659 coding downstream 160240 4409983 ~ 4423443 (+)
AMCG00019114 crygn,LOC102796340 coding downstream 181153 4430896 ~ 4433550 (+)
AMCG00019115 NA coding downstream 188689 4438432 ~ 4452436 (+)
AMCG00019118 NA coding downstream 229690 4479433 ~ 4491005 (+)
G31461 NA non-coding upstream 383789 3864189 ~ 3864604 (+)
G31432 NA non-coding upstream 859708 3353340 ~ 3388685 (+)
G31430 NA non-coding upstream 903149 3344755 ~ 3345244 (+)
G31380 NA non-coding upstream 1082721 3139687 ~ 3165672 (+)
G31351 NA non-coding upstream 1171237 3076916 ~ 3077156 (+)
G31566 NA non-coding downstream 497805 4747548 ~ 4747749 (+)
G31622 NA non-coding downstream 723229 4972972 ~ 5030095 (+)
G31663 NA non-coding downstream 844138 5093881 ~ 5127629 (+)
G31690 NA non-coding downstream 928191 5177934 ~ 5183039 (+)
G31799 NA non-coding downstream 1323029 5572772 ~ 5577699 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 1037503 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 1148222 3094452 ~ 3100171 (+)
AMCG00019089 NA other upstream 1630341 2520104 ~ 2618052 (+)
G31110 NA other upstream 2100830 2141830 ~ 2147563 (+)
AMCG00019064 NA other upstream 2362842 1861829 ~ 1885551 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 69853 4319596 ~ 4368203 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 1680961 5930704 ~ 5939597 (+)
G32005 NA other downstream 3170758 7420501 ~ 7421083 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 4095712 8345455 ~ 8384592 (+)
G32286 NA other downstream 5011631 9261374 ~ 9539211 (+)

Expression


Co-expression Network