AMCG00019108


Basic Information

Item Value
gene id AMCG00019108
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 4185740 ~ 4207481 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019108
AGGGTGAGAGAGGAGGCCCTGGGGAACCCGGGCCAGACGGACAAGGAGGACCTCCGGGCTTCAGGGGCCTGCCGGGCCGGCCTGGACCTGTGGGAGCCAAAGGCGAGCGTGGCATCCCAGGTCTTAAAGGGACAACGGGACCCCAAGGACCCCAGGGCAATCAAGGCCCCGTCGGCCCACCTGGCATCGAAGGACTCGAGGGCCCGAAGggaGTTCCTGGGGAGCGCGGGATAGCGGGGGTTCCTGGGCTTCCAGGACAGAAAggaaTGCAAGGAGAGCAGGGGATTCAGGGGCTGCCTGGCCCGATGGGGAATCGTGGATTAAAAGGCCACAAGGGGGACACTGGTGAACCCggtgaaaaaggaaaacagGGTGATCAAGGCTCAATGGGAATCCCTGGGGCTCCTGGGATACAAGGTGATGCTGGGCTCAAAGGAAGCAAGGGAGAGAAAGGCACAGTTGGAGATTTGGGAATCCGAGGGCCTGATGGGAAAAAGGGAGACGTTGGGCCCGTCGGCGCTGTTGGGCCCCGTGGACCTTCAGGCGGGGATGGGTTACCGGGGCAGCCAGGAGTGCCTGGCTATCCAGGGAAGCCTGGCTCACCAGGTGTCCCAGGGCCCCCAGGTCCTCAGGGCCCCAGCGGCCCCCCTGGATACCCTGGCAGGGTGGGAAGGCAAGGATATCCAGGGCCACCTGGGCTGCAGGGATCTCAAGGAATTAAAGGTGACACTGGGCCAAGAGGCGACAAAGGCTCGAAAGGAGAAGGACACACTGGATTGCCCGGGCCAACTGGTTCACCAGGGCCCCACGGGACGCAAGGTAGGGACGGTGAGGGTCTCCCTGGGCCCCCCGGCGATCAAGGCAAAGCTGGGGCAGCTGGCATCCCTGGGAAACGGGGCCCACCCGGACACCCCGGCGTCTGTGACATGACGCTCTGCTACAACACCTTCGAGCTCAGACAGAACCGCTTCAGCAAAGGACCCAACTTCTAGAGCGTCTTCCTCAAAGGGGGAATATCCACAGAAACTTGGCCTggtataaaacaacaataaaacagtgtttAGTGCACTAGCAAAGCTGCAATCAATATCTCTAATCGGTTTAAGGGCTAgatgcaaataaaatgaaccACACAATGTAAATTGTTTGTAGTTACCCAGTGACCAAATGGATAGCTTGCATAGTATTCAATATATGGATCTTCATGGTGCACCGCCTTAGTTATGCTACCTCCATGTTTTACCCAAGGACTTAAGGAGTTCTGTGTACAACATCATCCCCATTGTACTTATCATAAAATACTTATCATACTGAGATTTAAGaggacatttgtttttcattagaaTTCTACTGTATTTGAcctcatttttatatatttatattatattatattatccaTTTAATTGAAAGCAGAAGAAACACAAGTTATCCTAATATTTCCAACTATCTGcttcaaaaacatgtttatcttCTCATTAATTGAGCCACAATTTATTAAGTCGACATACATCTTAGGATTTAATTGACAGTACTCCTTACAGAAGAAAAcctcttatttgtatttaaaacttcCCAATGGAACCATGCTTTTAGTATTCTACAATAGTTTGATTTTGCATCTCACTACTAATACGTTAATATGCATTAAGACTGTTGTTTGGTGTATTTCAATCTCAGGAAAGGAGCTGTACTTTGTTCTTGTGCCTAAAATTTGACATGTTATATGGTGGCATTTGGTTCAGTATTCAGAAAGCTTAAGTTCACCCATAATGCTTTTGTCAAAACTTTATATTGATGAGTATAGCTCAGATTGTTTATTACACTTCTGAAGACATGTAGTGACTTCTTTAACATGTCTAAACTTGTTGCTTTATAGATGCACAGAAATGACCAAAGCAAAGTATCCCCGTCTCATTCGGTAGGGACGGTGTaacctgggtgatgtgctgtgttgggtttgcccCAGACGTAACGCTTTGCTTTTAGACCAAATGGTAAAATGTTTGTATCATTGGACCACATAATCTTTGTAACATCTTTTCAGAGTTTCTCACATGTCTATCTGCAAATTCCAAttgaattttttgtttttgaaatggcttccttcttgccataCAGGCCAGATATGGGGAGAACGTCTGCTATTGatgacacatggacagtttctctcATCTCAGCCAGTTGTCTTTGGCCTCTTGGTtgcttctctgaccaatgctCAATGCCCTTCTTACCCTGCCGCTAAATTTGGGAGGTCAGCCTTCTTgaagcagattctgggtggtgtcgtataccttccacttcttaatgatcgacttgactgtgctccaagggatattcaatgcctttgaaatctttTGATACCCCTCCCCTGATCCGTGACCttccacaactttatcccagagttgttttgaaagctccttggacttcatggtcgtatctttgctttgaatacACTACCCAcctgtgggaccttacagagacaggtgtatttaatctgaaatcatgtcaACCACCATTATTTTTGATGTCATTGGACACAGATGGACTCCACTGAACAATtcgtgtgaattctgaaggcgattggttgcacctgagcatatttaggagtgtcatagcaaagggacTGAacacttttcaggtttttattttgaattggtTTGGTTTTTCACTCATTTATCCCCACATTGCAAGTGTGTAGTAGGTTGTGTAGATCAGAAGAAACAAATCCCATTTATATGGTTGTAACAcaatcaaatggaaaacaaagccCTAGGGGcatgaatacttcctatagggACTGTATATGCTCTTAAATACTCACTATTCTAATCAAGTGCCCTGATAATTTGCTAGATGGGCGCTCTTTACCCTGAAGGGAAATTGAGAcagtatatttgaaatattacaagTCACATAGAGGGATAAATAGAAAAACTACCTAGATTTGTTAACATAATGCATCATACTGTAGTGCGATGTTTTAAGAAGTCATCCTATTTTAATCTAATGGAGGAATATTCAGCAAATGCACTTCATCTACAAAGGCTGATGAGCTTTGGCTCAAAAGTGTTGAGTGGGTCAGACGGCCTTCTGTTAGCAGTTCACTTGAGTCAGTTCTTCACTGGAATAGTACTAATTGAATTGCTGTGCTTTGATGTACCTGCCTTAAACACCATCCAAATTCGTAGAACTATAATgactttaatattttcacttgtTACAGGAGCCCTGGTTAACACAGTTGATTTTTAACTGTTTGGCAGCTCATGTTATggcattttgttcatttatttatttttaaaaggcatttctTAAAATGATCGATTGATGTATTAATCCTTACAATATATGTTCctttgtgaattatattaattttcctATTAACAGGCTTAAAAATCAGCAAGCAAATAACTGTTCTAAACTTTTATATACTACACTACGTAGGGAAGAAACTTTTTCCAGCCTGCCTCGCTACTCTGTAATTAGGTATGCCAAGCAGGAGCCTTCATCCCCAGTACAATGTAGCATATCGAAAGGGAAGAGCAAAAGcattaacatttaatgaaagGATTTAAAGGAAACAGAAAATCCGATGTTGGAGATTTGTAGGTAAGATGTATTGAGAGAAACTGCAAAGTATGGCAATCAGATCCAAAGTTTTAGTCAGGAATATATCGAAATACCATGCGGGGCTTCCACAGCGCTGGGCTCTTAGGGAAACCGATACATAGAGGCCTGAAAATGGggcaaaacaattatttattacgTGCAGTGCAGGGGTTAAACTATTCCATccctacagaaaaaaaaactcctacAAACAGACTATGATCACAACTAGACAAATCGACATCAAAATCGAAGTCCCAGTGCATAAGCAAAAGTCAGTTACCAGCAGTCTTGTCCCTGGCGCAGCGCACCCCTTGCGGTCGTCTGCCTCTTCCCAGAAAGTGGAAATTCACTTAggtcaccctcaccctcaccccaACAACCAAGATGTGCtctgcttcctgcttttattCAGGCACTGGCCAATCACTTCAggtcatataatatatatatatatatatatatatatacatacactcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019108 True 4093 mRNA 0.44 13 4185740 4207481

Neighbor

gene id symbol gene type direction distance location
AMCG00019110 NA coding downstream 8902 4175475 ~ 4176838 (-)
AMCG00019105 NA coding downstream 119796 3878696 ~ 4065944 (-)
AMCG00019103 fzd8,fzd8a,LOC106578536,LOC102789550 coding downstream 885654 3298338 ~ 3300086 (-)
AMCG00019102 NA coding downstream 1012304 3171748 ~ 3173436 (-)
AMCG00019098 NA coding downstream 1017610 3150830 ~ 3168130 (-)
AMCG00019112 NA coding upstream 161666 4369147 ~ 4383176 (-)
AMCG00019117 NA coding upstream 249979 4457460 ~ 4468048 (-)
AMCG00019116 NA coding upstream 264675 4472156 ~ 4475867 (-)
AMCG00019123 LOC108436082,LOC106579582 coding upstream 559988 4767469 ~ 4791923 (-)
AMCG00019122 NA coding upstream 616468 4823949 ~ 4840696 (-)
G31471 NA non-coding downstream 189617 3995888 ~ 3996123 (-)
G31470 NA non-coding downstream 249617 3935900 ~ 3936123 (-)
G31454 NA non-coding downstream 547499 3633856 ~ 3638241 (-)
G31444 NA non-coding downstream 583129 3602400 ~ 3602611 (-)
G31431 NA non-coding downstream 840500 3344857 ~ 3345240 (-)
G31516 LOC106599727,LOC103368950 non-coding upstream 124690 4332171 ~ 4332577 (-)
G31517 NA non-coding upstream 127770 4335251 ~ 4335497 (-)
G31518 NA non-coding upstream 133928 4341409 ~ 4341653 (-)
G31519 NA non-coding upstream 143206 4350687 ~ 4350990 (-)
G31520 NA non-coding upstream 145937 4353418 ~ 4353620 (-)
G31130 NA other downstream 2007090 2177980 ~ 2178650 (-)
G31082 NA other downstream 2102469 1932341 ~ 2083271 (-)
AMCG00019059 NA other downstream 2289308 1882454 ~ 1896432 (-)
G31035 NA other downstream 2475197 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 2862144 1321614 ~ 1323596 (-)
AMCG00019109 NA other upstream 12962 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 724868 4932349 ~ 4940667 (-)
AMCG00019128 gorasp1,LOC103377203 other upstream 733578 4941059 ~ 4986384 (-)
AMCG00019165 NA other upstream 2473144 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 4639670 8847151 ~ 8901878 (-)

Expression


Co-expression Network