AMCG00019119


Basic Information

Item Value
gene id AMCG00019119
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 4520057 ~ 4551901 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019119
ATGAGGCCAGTTCCTGGAACCAGAGTGCTGGCCACCGGAGGCGCCTCCTCAAACACGGACATCTTACAGGTCCTGGCGGATGTGTTCAACGCCCCGGTGTTCACAATCGACACGGCCAACTCGGCCTGCCTCGGCTGTGCTTACAGGGCCAGACACGGTAAGAACGGGGAGGAAGCGCCTGCAGGACTCATTGCTGATCAAGGTGTGCGCTTTTCCGAAGCTGTCAGGGACGCCCCGGAGCCACGGCTGGCAGTGACACCGATGCCGGGAGCAGAACAGGTGTTTGTGCCGCTGCTGAAGAGATACGCAGAACTGGAGGAGAAAGTCTTCCTGGAATCAAAGCAATGA

Function

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019119 True 348 mRNA 0.59 5 4520057 4551901

Neighbor

gene id symbol gene type direction distance location
AMCG00019118 NA coding upstream 29052 4479433 ~ 4491005 (+)
AMCG00019115 NA coding upstream 67621 4438432 ~ 4452436 (+)
AMCG00019114 crygn,LOC102796340 coding upstream 86507 4430896 ~ 4433550 (+)
AMCG00019113 rheb,LOC106579659 coding upstream 96614 4409983 ~ 4423443 (+)
AMCG00019106 NA coding upstream 237305 4268251 ~ 4282752 (+)
AMCG00019121 acvr2b,actriib,LOC108436077 coding downstream 164061 4715962 ~ 4723781 (+)
AMCG00019120 NA coding downstream 181652 4733553 ~ 4743233 (+)
AMCG00019125 wdr48 coding downstream 360630 4912531 ~ 4930234 (+)
AMCG00019126 NA coding downstream 398126 4950027 ~ 4963233 (+)
AMCG00019127 NA coding downstream 416220 4968121 ~ 4977890 (+)
G31461 NA non-coding upstream 655453 3864189 ~ 3864604 (+)
G31432 NA non-coding upstream 1131372 3353340 ~ 3388685 (+)
G31430 NA non-coding upstream 1174813 3344755 ~ 3345244 (+)
G31380 NA non-coding upstream 1354385 3139687 ~ 3165672 (+)
G31351 NA non-coding upstream 1442901 3076916 ~ 3077156 (+)
G31566 NA non-coding downstream 195647 4747548 ~ 4747749 (+)
G31622 NA non-coding downstream 421071 4972972 ~ 5030095 (+)
G31663 NA non-coding downstream 541980 5093881 ~ 5127629 (+)
G31690 NA non-coding downstream 626033 5177934 ~ 5183039 (+)
G31799 NA non-coding downstream 1020871 5572772 ~ 5577699 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 151854 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 1309167 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 1419886 3094452 ~ 3100171 (+)
AMCG00019089 NA other upstream 1902005 2520104 ~ 2618052 (+)
G31110 NA other upstream 2372494 2141830 ~ 2147563 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 1378803 5930704 ~ 5939597 (+)
G32005 NA other downstream 2868600 7420501 ~ 7421083 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 3793554 8345455 ~ 8384592 (+)
G32286 NA other downstream 4709473 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 4777578 9329479 ~ 9348819 (+)

Expression


Co-expression Network