AMCG00019127


Basic Information

Item Value
gene id AMCG00019127
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 4968121 ~ 4977890 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019127
GTGATACATGGGGGTCCTGCTCCTTTACACCATGCCGTACACAATGAGAGGAGTGCCGAGAGAGTTGTCGGAGGGAATGATGCCCGTCCAAACTACTGGAGATGGCAGGTCTCCCTGCAATTTTCTTATGAAGACAACGAGACTTACTTCTACCACACCTGTGGAGGCACCCTCATTTCTCCCACGTTTGTCATGACTGCGGCCCATTGTATTCTCAAccCTCAAGGTACAAACTATCGTGTTGCTTTAGGAGATTACAACCTCTTTGAGTATGAGGGCAGCGAGATCTTCATTCCTGTGAAAAAGATTGTGCTGCATCCCAAGTGGACCGGTGACCTTGGCAATGGatttgacATTGCCTTGTTGATGCTGGCTTCCCCAGCCTATGACAACGGCTTCATCGAAATGGCCAACCTGCCAGCGTTCGACCAGTCCCTTCCCCACGGCTTTCCCTGCTACATAACGGGATGGGGGCTGACCCAGTctggagGCAGTGTTCCTGCCATTCTCCAAGAAGCTGTGCTTCCTGTAGTCCAGCACTCGGTCTGCTCCAGTAATGAATGGTGGGGTGGCCTTGCGAAGAAAAGCATGATCTGTGCAGGAGGAGACGGCTACTTGGCTGGGTGTCAGGGCGACTCCGGTGGCCCATTGAGCTGTTTCACCGACGGCACCTGGAAGGTTTACGGTGTTGTCAGCTACGGCCCCGCTGGGATGTGCAACACCTACAGGAAGCCGACCGTCTTCACTCGTGTGTCTTCGTACGTCGACTGGATCTTCAGTgaagacaaacacacatacacgcaaGAACACCACAGTTCTGCGACAGCAGGTCCAGCTGAGAGAGACTTCACTATCATCAACAAACCCAAGGTGGTAGGAGGGGTAGAAGCCAAGCCGAACAGCTGGCCCTGGCAGATCTCCCTGCAGTACACCTACGTTAATGCCGGGGGCTGGGGCGTTGTGTGTGGGGGCACCCTGATTACACCCAACTGGGTCATGACTGCGGCTCACTGTGTCGATTTTGACGATGGCTCCATCTACCGTGTGGCTCTGGGGGAGCACAATCTGTTTGTGTACGAAGGGACTGAGTTTTACAGGGATGTTGTTAGGATCATCATACACGAGGAATGGACCGGTTCTCTGGCTAAAGGGTTCGACATCGCCCTGCTTCGCCTGGCCCAGCCTGTCTATGACAGTGCCACCGTGCAGGCGGCCGCCCTGCCTCCCGctggtgccatcctccccagcGGATTTCCGTGTTACATCACCGGCTGGGGCTTGACTGAGGACAGAGGCGACCCGTCTCCCGTCCTCCTGCAGGCTCTCCTCCCCGTCGTTGACATCCCCACCTGTGCCACCAACGAATACTGGGACTACTACGCCCAGGAGAACATGATTTGCGCGGGAGGAGATGGGATGCTGGCTGGATGCAATGGCGACTCTGGTGGGCCCCTGAGCTGTCAGGTGAACGGAGTCTGGCAGGTCCATGGCATCGTTAGCTTCGGCCCATACATCTGTAACATCTACAAGAAGCCAACCGTCTTCACTCGAGTTTCAGATTACATCAGTTGGATGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019127 True 1578 mRNA 0.55 13 4968121 4977890

Neighbor

gene id symbol gene type direction distance location
AMCG00019126 NA coding upstream 4888 4950027 ~ 4963233 (+)
AMCG00019125 wdr48 coding upstream 37887 4912531 ~ 4930234 (+)
AMCG00019120 NA coding upstream 224888 4733553 ~ 4743233 (+)
AMCG00019121 acvr2b,actriib,LOC108436077 coding upstream 244340 4715962 ~ 4723781 (+)
AMCG00019119 NA coding upstream 416220 4520057 ~ 4551901 (+)
AMCG00019131 NA coding downstream 147716 5125606 ~ 5139208 (+)
AMCG00019133 LOC103360316 coding downstream 162670 5140560 ~ 5142326 (+)
AMCG00019132 NA coding downstream 169825 5147715 ~ 5152017 (+)
AMCG00019141 NA coding downstream 303408 5281298 ~ 5305514 (+)
AMCG00019140 NA coding downstream 328523 5306413 ~ 5318056 (+)
G31566 NA non-coding upstream 220372 4747548 ~ 4747749 (+)
G31461 NA non-coding upstream 1103517 3864189 ~ 3864604 (+)
G31432 NA non-coding upstream 1579436 3353340 ~ 3388685 (+)
G31430 NA non-coding upstream 1622877 3344755 ~ 3345244 (+)
G31380 NA non-coding upstream 1802449 3139687 ~ 3165672 (+)
G31663 NA non-coding downstream 115991 5093881 ~ 5127629 (+)
G31690 NA non-coding downstream 200044 5177934 ~ 5183039 (+)
G31799 NA non-coding downstream 594882 5572772 ~ 5577699 (+)
G31820 NA non-coding downstream 771927 5749817 ~ 5750063 (+)
G31867 NA non-coding downstream 1186841 6164731 ~ 6167316 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 599918 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 1757231 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 1867950 3094452 ~ 3100171 (+)
AMCG00019089 NA other upstream 2350069 2520104 ~ 2618052 (+)
G31110 NA other upstream 2820558 2141830 ~ 2147563 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 952814 5930704 ~ 5939597 (+)
G32005 NA other downstream 2442611 7420501 ~ 7421083 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 3367565 8345455 ~ 8384592 (+)
G32286 NA other downstream 4283484 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 4351589 9329479 ~ 9348819 (+)

Expression


Co-expression Network