AMCG00019129


Basic Information

Item Value
gene id AMCG00019129
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 4932349 ~ 4940667 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019129
ATGCGCAGCCCGTCCTGCAGCGAGAGGAGCTCCGAGCTGGGCAGCTGCTGCAGGTCCTGGGACGACAGCAGCAACTACTCGGCCCTGCACTTCGGCAGCATCTCGGAGGTGGACAGCACTGAAGAGGATAAGCGAATCGCCAGTAAAGCGGTGGCCTATGTCATCCAGAGCACAAGAAGAGGAATCATCCCCCTCTGTTCTAATGTGGCTCAACTCATGAAGTCCAAAAGGAGgcTTGAACGAATAGTCCAGTCCCAGCAGATGAAAATCAGCCGATTACAGAAAGATGCTCATCCCTTCGGACCTCAGGCCTTGTCCAGCTCACGGGACAGATTGCCTGAGCCCACTGACTCAACACTGAAGTCACGCTCCGAGCAGACTACAGCTATCTGCCACGGGGACCCACCTGATGACTCGGCACTGAGCCCAATGGCAGTGAAGACCGAGTCCTGTCGAAATGACCAGCTAATGCAGATAAATCCTGGGTCGAGTTCTGCCGACACCACGCTGGACTCGGACCTACCAGCGAAAGTGGAACCAGCAGGGAAGTCCAAGATGCTGGTGTCCAAGGAAGTTCAGGTGGAGAGCCCCTGTCTCCTCATGGAGAAGACGTGTGAAGATCGATTCATGGAAAGTAGCGCTGTCTTCCACAGGGACTCCAGCTTGGGTTGGTCTCTGTTTCCCTTTCCTATGATCGGCTGCAAGTGCACCAGCTGCTTGTGCTTCTTCAGCAGACACGTCAAGGGCAGGAAGCACAACGCAAAGGAGTTTAAATCTCTGCTCAATTTTCAGAGAAAAAAGGTGCAGGTGAGCATACAAGACTACATCATTGTTAACGGAAATCAATCTGGAACGGTCCACTATATCGGACACCTGGACGACGCCGGCACTGCAAACGCAGTCTTCCTCGGAGTGGAACTGGACGAACAAAGTGGAACACATGATGGCGTTTTCAAAGGAAAGAGATATTATCAGTGCTTCGATAACTGTGGGCACTTTGTTCCCGTTCACGAAGTGTGTTACAGAATTAGTCGCAAGTATAAGCCCGAAAAATTAACCTCTTCAGCTCCGCCCCGTCTTCAGCGAAGGTCCTCCACGGGCTCGATCAGACCTTCTGGCCAGAGCAGCTGCAACGGCAGTCGAGTTGACCTCGGCCACCAGACGGTCATCGAGAAGAAAAGTCGAAGTCCCAGCGAGCCGGTGCCGGGAAATGAGAGATCACCGAGGAGAACGAACAGGGGCAGTGTTGTCCGTAGGGGGCAGGAGGCCGGGCGGCTCGGGCCAGCCCGAGGAGAGATGCAGCTGCTCGCCcatttcctctccctcttcacCCCCAACCCGCCCTTCAAGATCTCGACACTGAGGGCCCCAGCTGCAGAGCCAACTTAA
>TU39603
CTCAAAAAGCCAGTGCGGCCGGGATGTCTGTCACAGATCAACACAAACCTCTCGGGAAGCACAGGACTCTCCTGTAGGGGGTGAGGCAAGGTTCCTAGAGGATGGGGGGACACCACCTGGGCCATTTGAAAACCAAACACCTCCTGAGCATCTGCAGTCCCTGTCTCACAGAGGAAATAATCAGAAGTCACACAGCGCTGTCTTCCACAGGGACTCCAGCTTGGGTTGGTCTCTGTTTCCCTTTCCTATGATCGGCTGCAAGTGCACCAGCTGCTTGTGCTTCTTCAGCAGACACGTCAAGGGCAGGAAGCACAACGCAAAGGAGTTTAAATCTCTGCTCAATTTTCAGAGAAAAAAGGTGCAGGTGAGCATACAAGACTACATCATTGTTAACGGAAATCAATCTGGAACGGTCCACTATATCGGACACCTGGACGACGCCGGCACTGCAAACGCAGTCTTCCTCGGAGTGGAACTGGACGAACAAAGTGGAACACATGATGGCGTTTTCAAAGGAAAGAGATATTATCAGTGCTTCGATAACTGTGGGCACTTTGTTCCCGTTCACGAAGTGTGTTACAGAATTAGTCGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019129 True 1389 mRNA 0.55 8 4932349 4940667
TU39603 False 595 TUCP 0.50 4 4932838 4935996

Neighbor

gene id symbol gene type direction distance location
AMCG00019124 NA coding downstream 57004 4857920 ~ 4875345 (-)
AMCG00019122 NA coding downstream 91653 4823949 ~ 4840696 (-)
AMCG00019123 LOC108436082,LOC106579582 coding downstream 140426 4767469 ~ 4791923 (-)
AMCG00019116 NA coding downstream 456482 4472156 ~ 4475867 (-)
AMCG00019117 NA coding downstream 464301 4457460 ~ 4468048 (-)
AMCG00019130 NA coding upstream 49056 4989723 ~ 5006444 (-)
AMCG00019137 NA coding upstream 230953 5171620 ~ 5176944 (-)
AMCG00019134 oxsr1,LOC107689410,LOC107695388,LOC107591273 coding upstream 237226 5177893 ~ 5202366 (-)
AMCG00019138 NA coding upstream 295734 5236401 ~ 5243714 (-)
AMCG00019135 myd88,LOC104955770 coding upstream 321048 5261715 ~ 5267644 (-)
G31572 NA non-coding downstream 254282 4677643 ~ 4678067 (-)
G31558 NA non-coding downstream 324492 4607563 ~ 4607857 (-)
G31526 LOC106599727,LOC106569160,LOC102785278 non-coding downstream 566948 4365162 ~ 4365401 (-)
G31525 NA non-coding downstream 567305 4364196 ~ 4365044 (-)
G31523 NA non-coding downstream 572003 4360107 ~ 4360346 (-)
G31774 NA non-coding upstream 478329 5418996 ~ 5511930 (-)
G31784 gars,LOC107591252,LOC107754935,LOC107682953,LOC107584992,LOC107733158 non-coding upstream 599453 5540120 ~ 5540948 (-)
G31803 NA non-coding upstream 632130 5572797 ~ 5574265 (-)
G31825 NA non-coding upstream 809220 5749887 ~ 5752086 (-)
G31826 NA non-coding upstream 844101 5784768 ~ 5802915 (-)
AMCG00019109 NA other downstream 702358 4220443 ~ 4229991 (-)
G31130 NA other downstream 2753699 2177980 ~ 2178650 (-)
G31082 NA other downstream 2849078 1932341 ~ 2083271 (-)
AMCG00019059 NA other downstream 3035917 1882454 ~ 1896432 (-)
G31035 NA other downstream 3221806 1705899 ~ 1710543 (-)
AMCG00019128 gorasp1,LOC103377203 other upstream 392 4941059 ~ 4986384 (-)
AMCG00019165 NA other upstream 1739958 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 3906484 8847151 ~ 8901878 (-)
AMCG00019213 NA other upstream 4310485 9251152 ~ 9434114 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 6911441 11852108 ~ 11885571 (-)

Expression


Co-expression Network