AMCG00019132


Basic Information

Item Value
gene id AMCG00019132
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 5147715 ~ 5152017 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019132
ATGGCAGACTTTGGGGAGATCTTAATTGCCATTGGCGACTACGGGCTCTTTCAGAAGCTGCTTCTTTTCGGGCTGTGCTTCCCCAACCTCATTCTGCCCTTTCATCTGTACAGCCTGATATTTACAGACGCAAACGATATCCATTACTGCAACACAGACTGGATTCTGAAATTTAACCTCGTGTGCAGAAATGCTTACCTGAGGATTGTCGCCCAGTTTCTTTTCATGGTTGGCATCATGGTTGGGGCTTTCATTTTTGGCCCACTTTCCGAGAGATTGGGTCGAAGACGAGCAACCCAGATACCCTTGGTACTGATGCTGATTTTTGGTTTAGGAACAGGACTGGCGCCTAATTACTATGTGTACATCACGACTCAGTTTGTAGTCGGGATATCATTCGGGGGCTTTCGAGTGAACTGTGTCTTATTAGCCACAGAATGGATCGGGGTGTCTAAGAGATCCTACCCCTCTTCCATCAGTAAAATCTGCAACGCTGTGGGCCAGTGCCTCATCGCTGTAATTGCCTTTTGCATTCGAGACTGGAGAATTGTGCAGTATGTCATCACATCTCCTTTGGTGGTCGTTGTCATTTATATATGGCTGATCCCAGAGTCCGCGCGGTGGCTGCTCTCCAGAGGAAGAAACGAAGAAGCCAAAAAGTTCATTCTGAAGGCAGCAGCGATCAATAAATCCACAGTCCCAAGTGAAATCCTTAACAAAATCACAGTGCACAAGAGCACTGATAATGGGACAATCTGGGATCTCTTCAAGTCACCTCTTTTAAGAAAGTACACCTTAATCTTGAACTTCTCATGGTTTGCAACTAACATAGCACTATACAGCCTGTCTTTCAATGTTGGGAATTTTGGCCTAAACATTTTTCTCACCCAGTTGCTTTTTGGTTTGGTTGAAATCCCAGCAAATTTCATCTGCATTTGGCTGCTGGAGATCTGGGGCCGTCGGATCTCCCAGATCTCCACACTGGTCGTAGGAGGAGTCATTTGTATTCTGATCTCCGCTGTCCCACAAGATAATGCAATTATCGTTACTTCTTTTGCAATTTTTGGAAAGTTCTGCATTACATGGGCTGGCACGGTCTGTAACGTGTTCATCCAGGAGGTGTTTCCTACGTCTGTCAGACAAAGTGCCAACGGATTGGGTGCAATGTCAGCTAGAATGGGAGGCATCCTTGCCCCTCTAGTAAATTTACTCAAAATGGTCCACTGGGCGATTCCCACTTCGATAAACGGGACTTTTCTCCTGGTCGGTGGCTGTCTGAGCTTCATGCTACCCGAGACCATGAGGACGGAGCTCCCGGACCACACGGACGACGTCTCTGTGAACGAT

Function

GO: NA

KEGG:

id description
K08369 ydjE; MFS transporter, putative metabolite:H+ symporter

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019132 True 1347 mRNA 0.47 9 5147715 5152017

Neighbor

gene id symbol gene type direction distance location
AMCG00019133 LOC103360316 coding upstream 5389 5140560 ~ 5142326 (+)
AMCG00019131 NA coding upstream 8507 5125606 ~ 5139208 (+)
AMCG00019127 NA coding upstream 169825 4968121 ~ 4977890 (+)
AMCG00019126 NA coding upstream 184482 4950027 ~ 4963233 (+)
AMCG00019125 wdr48 coding upstream 217481 4912531 ~ 4930234 (+)
AMCG00019141 NA coding downstream 129281 5281298 ~ 5305514 (+)
AMCG00019140 NA coding downstream 154396 5306413 ~ 5318056 (+)
AMCG00019139 acaa1,LOC102793903 coding downstream 168256 5320273 ~ 5325949 (+)
AMCG00019143 NA coding downstream 214449 5366466 ~ 5390362 (+)
AMCG00019146 gars,LOC102797257,LOC107591252,LOC103132552 coding downstream 381663 5533680 ~ 5542935 (+)
G31663 NA non-coding upstream 20086 5093881 ~ 5127629 (+)
G31622 NA non-coding upstream 117620 4972972 ~ 5030095 (+)
G31566 NA non-coding upstream 399966 4747548 ~ 4747749 (+)
G31461 NA non-coding upstream 1283111 3864189 ~ 3864604 (+)
G31432 NA non-coding upstream 1759030 3353340 ~ 3388685 (+)
G31690 NA non-coding downstream 25917 5177934 ~ 5183039 (+)
G31799 NA non-coding downstream 420755 5572772 ~ 5577699 (+)
G31820 NA non-coding downstream 597800 5749817 ~ 5750063 (+)
G31867 NA non-coding downstream 1012714 6164731 ~ 6167316 (+)
G31872 NA non-coding downstream 1035375 6187392 ~ 6187723 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 779512 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 1936825 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 2047544 3094452 ~ 3100171 (+)
AMCG00019089 NA other upstream 2529663 2520104 ~ 2618052 (+)
G31110 NA other upstream 3000152 2141830 ~ 2147563 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 778687 5930704 ~ 5939597 (+)
G32005 NA other downstream 2268484 7420501 ~ 7421083 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 3193438 8345455 ~ 8384592 (+)
G32286 NA other downstream 4109357 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 4177462 9329479 ~ 9348819 (+)

Expression


Co-expression Network