AMCG00019152


Basic Information

Item Value
gene id AMCG00019152
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 5755405 ~ 5773697 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019152
ATGTtgaattatgcatttcattactTAAACCTCCcgaacaaaatcattaaaatctcCTTTTGTTACTCAGGTAATGTCACAAGAAACTGTACCGGGGAAGGCTGGACAGAATTATATCCCGTCTCCTATTTTTTTGCATGTGGGTATGACCCCAACACCACCAACATCGCCAATGAGGAAGAGggtTTCTATAAAATTGTGAAGATTGGCTACACAGTCGGCTATAGCCTCTCTCTGATTTCTCTCACTGCAGCCATCATCATACTGTGCATCTTCAGGAAGCTGCACTGCACGAGAAACTACATCCACATGCACCTGTTCATGTCCTTCATCCTGAGGGCGATCTCCGTCATCATTAAGGACGTGATCCTGTTCGGCTTTGAAGAGTCGGATCTGTGCCCCATGCCCTCTATTGGCTGCAAAGCTGTGCTAGTCTTCTTCCACTACTGTGTCATGGCCAATTATTTCTGGCTTCTGGTGGAAGGCCTTTACCTGCACACCCTGTTGGCCATTTCATTCTTCTCTGAGAGGAAATACTTTTGGTGTTACATCTTGATCGGTTGGGAGAGATGCTGGAATACTATAGTACATCCATACTGGTGGATCATAAGGGCACCCATTGTATTATCAATATTGGTAAACATGTGTCTGTTCATTTGCATTATTCGGATTTTGGTCCAAAAGGTGCATTCTCCCGACGTGGGAAGGAATGAATCGAGCCAGTATCTACGGCTAGCGAAATCCACATTGCTGCTGATCCCCCTCTTCGGGATACATTACATCGTATTCTCATTTTATCCCGACAACTTTGCAAAGAATATCAAGTTCATCTTTGACCTCATCCTCGGTTCATTTCAGGGCTTCATTGTAGGTGTCCTGTATTGTTTCCTGAATGGAGAGGTAACACATCCTGTTTTGCAgttgttaatttga

Function

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04589 VIPR1; vasoactive intestinal peptide receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019152 True 933 mRNA 0.44 9 5755405 5773697

Neighbor

gene id symbol gene type direction distance location
AMCG00019150 LOC104941974 coding downstream 83419 5635702 ~ 5671986 (-)
AMCG00019149 zbtb47,zbtb47b,LOC107701620,LOC107733141,LOC107754947,LOC107670424 coding downstream 167063 5582228 ~ 5588342 (-)
AMCG00019145 LOC103360289 coding downstream 319285 5419981 ~ 5436120 (-)
AMCG00019144 NA coding downstream 349699 5391065 ~ 5405706 (-)
AMCG00019142 NA coding downstream 405891 5326041 ~ 5349514 (-)
AMCG00019153 NA coding upstream 174192 5947889 ~ 5962147 (-)
AMCG00019155 NA coding upstream 352496 6126193 ~ 6145464 (-)
AMCG00019158 NA coding upstream 384168 6157865 ~ 6161502 (-)
AMCG00019157 NA coding upstream 391486 6165183 ~ 6191211 (-)
AMCG00019161 myl3,LOC107660402,LOC107567878,LOC107711693,LOC107593749,LOC107727541 coding upstream 660815 6434512 ~ 6451611 (-)
G31825 NA non-coding downstream 3319 5749887 ~ 5752086 (-)
G31803 NA non-coding downstream 181140 5572797 ~ 5574265 (-)
G31784 gars,LOC107591252,LOC107754935,LOC107682953,LOC107584992,LOC107733158 non-coding downstream 214457 5540120 ~ 5540948 (-)
G31774 NA non-coding downstream 243475 5418996 ~ 5511930 (-)
G31572 NA non-coding downstream 1077338 4677643 ~ 4678067 (-)
G31826 NA non-coding upstream 11071 5784768 ~ 5802915 (-)
G31829 NA non-coding upstream 43379 5817076 ~ 5817433 (-)
G31831 NA non-coding upstream 128675 5902372 ~ 5902637 (-)
G31833 NA non-coding upstream 150017 5923714 ~ 5927593 (-)
G31845 NA non-coding upstream 190567 5964264 ~ 5986796 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 769021 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 814738 4932349 ~ 4940667 (-)
AMCG00019109 NA other downstream 1525414 4220443 ~ 4229991 (-)
G31130 NA other downstream 3576755 2177980 ~ 2178650 (-)
G31082 NA other downstream 3672134 1932341 ~ 2083271 (-)
AMCG00019165 NA other upstream 906928 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 3073454 8847151 ~ 8901878 (-)
AMCG00019213 NA other upstream 3477455 9251152 ~ 9434114 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 6078411 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 6639457 12413154 ~ 12423320 (-)

Expression


Co-expression Network