AMCG00019156


Basic Information

Item Value
gene id AMCG00019156
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 5969442 ~ 5980521 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019156
ATGAAGTTGGTGGATGAAATGGCACAGATGCTCTGGAAACAGGTCTTCCAAGAAAAGCTGCTTTATCTCATCGGCCTGCTGCGGAAATCCCAGAAGGATCTGCTCAGCAACCTGTTTGCTCATGACAACAAGGAGCAGAAGAAAACCAGGGGCTACCTCAAAGTCATCACCGTGGTCTCCAAGTTTAAGAGCTCGCTGGACAGCCTGATGGATGTTCTGGAcagcactactccacactacatAAGGTGCATCAAGCCTAACACAGCCTGCCAGCCACTCGCCTTTGAAAAGGAAGAGGTCATGGCACAGCTGGAAGCCTGTGGCATTGTGGAATCCGTCAAAATCAGTGCAGCTGGGTTTCCTATCCGAATTCCAAACGCAGCCTTCATGAAGCGATACGGGCTGATCGCCAACGTGAAGATCTCATCCAAACAACTGAGCAGCTTAGGGTCAGAGGCCAGCAAAGGCATCCTGGGCCCCGCAGTCAGTGACATTCTCTGCATCGTCCTGAAGCGCCCACCCGCTCCCTCGGACCCCCATGACCGCCAGCCTCACAGTTCACTGGTGCACTGTGGGAACACCAAAGTCTTCATCACTCCCGCTATGCTGGAACTACTGGAGGCCTTAAGAAACCAAGTTCTCTGCCGCCAAGCGTCCTGCATCCAGCGCTGTGCGTTCCTGGTTGCTGAGGAGAGACATTCTCAAGAGGCACACGGCCGCCACCTGCATCCAGAGAGTCTGGAGAACGTGGAGGTTGGAACTAATGTCTCCAACAGTAAAGTCTCCACCTCTGCCTCCTGGAAAACACGCTGGCCAGGGCTGCTCTGTGCTCAGGGTCTCCTCACCCAGACTGCTCAGGAGGAAGATCATCAAGTGGCAGAGGGCCAGCACCATCATCCAGAGAAGCCAGACGACAAGAAAGCGTATTTCAGTTTCACTCGAGGCTATGATGGAAGCCCCAGGTCTCAATCAGATGGCCGGTCTGAAGAGCACCTACCAGGGTCAGAGGCCAGCAAACGTATCCTGGGCCACGCAGTCAGTGACCTTCTCTACATCGTCCTGAAGCGCGCACCCGCTCCCTCGGACCCCCATGACCGCCAGCCTCACAGTTCACTGGTGCACTGCGGGAACACCAAAGTCTTCATCACTCCCGCCATGCTGGAACTACTGGAGGCCAAGCGTCCTGCATCCAGTGGTACTGGAGGCGCTACTGCAGCAGAAAACAACAGGCCAGCCAGAGACACGCAGCGACTGTCATCCAAGCAGGCAAGTGTCCACACGCTGTCCGGGGCTGCTCTGGGCTCAGCCTGTGCATTCCTGGTTGCTGAGGAGAGACATTCTCAAGAGGCACACGGCCGCCACCTGCATCCAGAGAGTCTGGAGAACATGGAGGCAATCGATCGACCATCCATTCCGACAATCTTCACTGAAGTTCGCCAACGTCCGCCCACATTCACAGGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019156 True 1464 mRNA 0.56 14 5969442 5980521

Neighbor

gene id symbol gene type direction distance location
AMCG00019151 NA coding upstream 284381 5673977 ~ 5685061 (+)
AMCG00019148 NA coding upstream 398906 5566296 ~ 5570536 (+)
AMCG00019147 hhatla,hhatl,LOC107718176,LOC107688529,LOC107722653,LOC107689424 coding upstream 405787 5549593 ~ 5563655 (+)
AMCG00019146 gars,LOC102797257,LOC107591252,LOC103132552 coding upstream 426507 5533680 ~ 5542935 (+)
AMCG00019143 NA coding upstream 579080 5366466 ~ 5390362 (+)
AMCG00019159 crhr2 coding downstream 331227 6311748 ~ 6312120 (+)
AMCG00019160 crhr2,LOC102776588,LOC106599903 coding downstream 374739 6355260 ~ 6380345 (+)
AMCG00019162 pth1r,LOC107671674,LOC106599896,LOC107660418 coding downstream 504557 6485078 ~ 6566493 (+)
AMCG00019163 NA coding downstream 626451 6606972 ~ 6668145 (+)
AMCG00019169 NA coding downstream 709394 6689915 ~ 6691084 (+)
G31820 NA non-coding upstream 219379 5749817 ~ 5750063 (+)
G31799 NA non-coding upstream 391743 5572772 ~ 5577699 (+)
G31690 NA non-coding upstream 786403 5177934 ~ 5183039 (+)
G31663 NA non-coding upstream 841813 5093881 ~ 5127629 (+)
G31622 NA non-coding upstream 939347 4972972 ~ 5030095 (+)
G31867 NA non-coding downstream 184210 6164731 ~ 6167316 (+)
G31872 NA non-coding downstream 206871 6187392 ~ 6187723 (+)
G31873 NA non-coding downstream 207914 6188435 ~ 6188700 (+)
G31874 NA non-coding downstream 208788 6189309 ~ 6189552 (+)
G31877 NA non-coding downstream 282116 6262637 ~ 6262840 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 29845 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 1601239 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 2758552 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 2869271 3094452 ~ 3100171 (+)
AMCG00019089 NA other upstream 3351390 2520104 ~ 2618052 (+)
G32005 NA other downstream 1439980 7420501 ~ 7421083 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 2364934 8345455 ~ 8384592 (+)
G32286 NA other downstream 3280853 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 3348958 9329479 ~ 9348819 (+)
G32293 armc4 other downstream 3389377 9369898 ~ 9628662 (+)

Expression


Co-expression Network