AMCG00019164


Basic Information

Item Value
gene id AMCG00019164
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 6669953 ~ 6678328 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019164
ATGGACAGCGACGAGGTGGTGAACGAGAGCCTGAGGCAGCAGTTCCAGGCTCTGCAGGCGCAGCAGCAGAAGCGCCTGCAGAAACGGCTGCAGAGGAAGGaggaggtgcagctgagccaGAGAGATCCTgtcagcacagagacagagtcCTTTAGCATCCAGGATGGGCTGAACCTCCTGGAGCTGGACCGAGAGCCAGCCGGTGGCATGGAAACCAGGTTACTGCAGGATGAGAATGGACAGCTGCAGGACCAGCTGCGCGAGCTGCGAGATGAGAGCGGCCGACTCCACAGACTCCTGAGCGAGAAGAACTTCGAGATCAAACACCTGAGGAAGAAACGAGAGGAAGACAGACTGGCTTTAGCAGGTACCTCGGGACTGGCAGGTGATGCAGCTGCCACGAAGATAGTAGAGCTGTCAAAGAGGAACCGGGAACTGACTGcggagatggagagggagaagacCAAAGTAAAGCAAATGAGCAACAGGGTCAAAGAGCTAGAGAAGGAGcccaGCAGTCCTGATGTGAAAGCTCTACAGGATAAACTGTCTGCAgctaattttaaaatgacagagtACCGCAACCAGATCCAAGCTGCGAAGCAAGAGCTCAAAATAGCACAAAAGGTTCTGGCCAGTGAGGTTGGAGAGGATGTGAACATCCAGCAGCTCTTGAGCTCCAGTGGGAACTGGCGTGGACGCTCCCAGCAGATCCTCGCTCTGCAGAACAGGGTGCGAGACCTGGAGATGCAGCTGGCACAGGGGGCTCAGAGGAAGCAGGCCTCAGAGCTCAGCTTCGAGGACATGCTGGGGGGCTTGCGGGGGTCTCCGCTACAGGACCGGAACGTCAGTCGCATTCGAGcgatggagagggagaagaaggaGACTTTAGAGAAGGTCACCGGCGAGTACGATACTCTCCAGAAGGAGCATGAAGAGCTGAAGAAGAAGCTTGAGGGATCCAAGGCCAGAAACAAAGTGCTGAGCAACGAGGTGAAGACACTGAAGGGCCAGATCTCCACCTTACTGGACAAGGGCAAGCATGATGACGAGCTGGTGGACGCTTTACTGAAGCAGCAAAAGCAGCTACAGGAGGTTCTGGGCCGCATGAGCCAGCAGGAGCAGAAGAGCAAGGAGAGCTCGGGCCAGCAGATGAGCACCGAGGCCCAGCGGCACAGCTCCCTCGTCCAGCAGCTCCGACAGATGGTTTCCGAGAGGGAAGCCAAGGTCAAGCAGCTCGAGGAAGAAATCACACAACTGTCTCTCAAGAGGCATGCTGAAGAGGAGGGCAGCTCTAAAGGTATGGACAGACCGCTGTCTGGGGGGCAGACGGAGAGGGGCGGTACCTGTAGCTCCAGACCTTCGACAGCAGTGGGCGATACCACTGAGAAGATGCCATCTGTGTCGTCTTGCAGAACCATTTCCAAACTGGGGCACACACTGGTCGAATCGGCAGCTACTCCTTCAATTAGCAGCTCTGCAGTGGGTGTGAACGCCGCCGATGTGAAGTCCCTGCAGGCCAAGTGCACCGAATACAGGGCACTCTACCAGGTGGCAGAGGTGGAGAGAGATAAACTGATGGAACTGGTGAAGGTGTTGCAGAAAAGAGAGCAAGAGACCAAGGACAGAGGTCTGGCCGCGGAGCAGGCGCTGCAGGCGGAGCGCAGGCGAGCCGTGGTCCTGGAGCAGCGCCTGGAGAAGGCCAAGCTGGTGTCGAGCCTCCTGGAGCAGCGACTGGAGAAGGCCAAGCTGGACCAGAGCCCAGGCCAGAGCTCCTACCGAGCAACACACAGGGGCAAAGCAGGCATATCTGCCAGCAGTACGGGGTTCGCTGTGAATCAGATCGACTCCTCGGACATCTCTCCTAGAGGCTCCCTGGGCGTAACTTTTGAGACTCAGGTCGAAGAACTAAACACAAAACTCGCAATCCAGCAGGATGAGAACGAGGCGTTGAAGGTGGCGCTCCAGAGCAGCCTGCAGGGCAAGGAGGAGGACCTGCGGCAGTACAATGACATGGTGGGCAAGGTGAAGCAGGTCTTCCTTCAGGCTCTGTGGAAGCACCGACAGGAGAAGGGCAACAGCAGCTAGCGGCTCCAGGGAACTGGATCTCCTCAGCAATGTGAGGTTCCTTGACCTCGTGAAGGGCTTGTCTTTCTGACTTGGAAGTCTGAGAACATTTGTACTTTGTGTGAAGAGGTGGCGCTTATTTCATTCCTGAACAGACCTGCTCAGATTTCCCTCTCGTGGCGTCTGGTCCTTGTTTAAGTGTTAAGTGCATCTCTCTccatgtgttgttttgtgttctttaaaCGCATTGAGAATCTTGAGCAATATAAAGTGATTGCCGTTTTAGAAGTGTATTTTTGTCACATATTACTCATGATAAAGAACAGGATAAGAGCGATCGTTGTTTAGCGTGTGCTGGTAATGTAGTGAATTGTGTTGTACTAGCTTTACACATGCTCAGTATCGCACAATACCAATAACGATGAAAGACATGGCATCATACAAAGAAAAGATTGGAAAACCAAGACTTGAATTTTCATCATTTGAAAAACTTTTTGTAAGTAATGATATATGGCATCTTTATATTTTCCAtacagcaaaatatatatttaaaacatatccCATATCAAAGGGCACAATTTTGGTATATACAAATACAGGCATCATACATTTCTACCAATCATTAATGGAAATTTAACTTTAAGCCCTGGACTTCCTTATGTATGTATCAGTTGCCAAGttataaaatctgtttttctaaaTTGCAGCCAAGAAGATTGCATCAGACgcctttatttttgttcttcccACATCTTCCCGCTCCGTTTATGAACACACAGACTTTCTGTCTGGGCTGAAATACCACACGATTTTACTGAGCATCCTTTGAGGCGCAGACATTCCCAATTTGGACTGAATTAAATCACCACAAGACAAACACATTCCAGTTATTCCAATTTATCACATAGCCTCCATGTGCTTTGAGAGGAATAAAGTGTTTTGCAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019164 True 3015 mRNA 0.51 13 6669953 6678328

Neighbor

gene id symbol gene type direction distance location
AMCG00019166 tmie,LOC107660419,LOC106569331,LOC102776014 coding downstream 37109 6615650 ~ 6632844 (-)
AMCG00019161 myl3,LOC107660402,LOC107567878,LOC107711693,LOC107593749,LOC107727541 coding downstream 218342 6434512 ~ 6451611 (-)
AMCG00019157 NA coding downstream 478742 6165183 ~ 6191211 (-)
AMCG00019158 NA coding downstream 508451 6157865 ~ 6161502 (-)
AMCG00019155 NA coding downstream 524489 6126193 ~ 6145464 (-)
AMCG00019170 NA coding upstream 99076 6777404 ~ 6781144 (-)
AMCG00019174 atg9b,LOC106599848,LOC107100460,LOC106569346 coding upstream 191186 6869514 ~ 6897553 (-)
AMCG00019175 asic3,LOC107383864,LOC106964295 coding upstream 265721 6944049 ~ 6963885 (-)
AMCG00019176 NA coding upstream 329456 7007784 ~ 7014100 (-)
AMCG00019177 asic1c,asic3,LOC106930524,LOC106599832,LOC106964295 coding upstream 500298 7178626 ~ 7179255 (-)
G31882 NA non-coding downstream 404817 6264691 ~ 6265136 (-)
G31878 NA non-coding downstream 407115 6262637 ~ 6262838 (-)
G31875 NA non-coding downstream 505416 6163989 ~ 6164537 (-)
G31845 NA non-coding downstream 683157 5964264 ~ 5986796 (-)
G31833 NA non-coding downstream 742360 5923714 ~ 5927593 (-)
G31931 NA non-coding upstream 9175 6687503 ~ 6687816 (-)
G31932 NA non-coding upstream 10532 6688860 ~ 6689516 (-)
G31933 NA non-coding upstream 11508 6689836 ~ 6692303 (-)
G31993 NA non-coding upstream 546261 7224589 ~ 7224997 (-)
G31997 NA non-coding upstream 612523 7290851 ~ 7291130 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 1683569 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 1729286 4932349 ~ 4940667 (-)
AMCG00019109 NA other downstream 2439962 4220443 ~ 4229991 (-)
G31130 NA other downstream 4491303 2177980 ~ 2178650 (-)
G31082 NA other downstream 4586682 1932341 ~ 2083271 (-)
AMCG00019165 NA other upstream 2297 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 2168823 8847151 ~ 8901878 (-)
AMCG00019213 NA other upstream 2572824 9251152 ~ 9434114 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 5173780 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 5734826 12413154 ~ 12423320 (-)

Expression


Co-expression Network