AMCG00019169


Basic Information

Item Value
gene id AMCG00019169
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 6689915 ~ 6691084 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019169
atGGCTGACCTGAGTGCCCTTAACAACGATTCTCAAGATGAACATGATGACATGTATGACTACAGCTACTACAACGAGTACTTGGAAAATGGAAACCACCTTCACAATTATGGAGTGTGTGAGAAGGGACACGTGAAGGCATTCGCGAGAGTTTTCCTGCCCGTACTGTACACCTCTGTGTTCGTGCTAGGAATGGTCGGGAATGGGCTTCTGGCTGGCATTTTGATCAGATATATCAAGCTCAAAAGAATGGTGGATATATACTTGCTGAACTTGGCCGTCTCAGACCTTTTGTTTGTGGTAACCCTGCCATTCTGGGCAGTCTATGCACATTCTGAGTGGATTTTTGGAAGCACTACATGCAAAGCTGTCACCCTAATTTACACCATGAATTTGTACAGCAGTATCTTCTTCATAACCTGCATCAGCTTGGACAGGTATTTGGAGTTCGTCTGGTCTTTCCACACCATTAACCTCAGGAAACTGCCAGTGAGTTGTGCGATCTGTGCAGCGGTGTGGACTGTCTCCGCCTTGGCCTCTGCTCCGGATGTCATCTTCACCGAGCTGCAAGAATTTAGAGATCATAAACTGTGTTTGCACAATTTCGGAGGGGAGCACATGTCCTGGTGGAAAATCTTCATGAAGTTCGAGCTGAATATTGTTGgttttttcattccatttctGGCCATGCTGTTTTTCTACTCCCGTATTTCTTGTGTCATAACCAGAGCAAAGCTCCACAGGGGAACCAAAAGTCTAAAGTTAGCTATTGCTttggtggttttttttttcgtgtTGTGGTTCCCTTACAACCTGGTGGTGTTCCTGCACTCTTTGCAAGACCTTCATGTGATTTCACACTGTACCACCAGCCAGCACCTAGACTTTGCCATTCAAGTGACGGAGAGCCTTGCTTTTGTTCACGCTTGCCTCAACCCAATCCTGTATGCATTTGTAAACAAGAAGTTTCAGCACCACCTCATGAGCATGCTGAAAATGATCTGCAGAAGAGGCAGAGAATATTCTCTGGAGCACGAAGGTCATTCCTCAACTCAAAACACTGTCACTGACTTGAGTGGGGGTGGAAATGCTCTagtctgtgtatcagtgttGCCAATTCTACCCATAGACCCCGAAATTGGGCTTGTCCAACAGAACAGTGGACTATAA

Function

GO: NA

KEGG:

id description
K04187 ACKR2, CCBP2; atypical chemokine receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019169 True 1170 mRNA 0.46 1 6689915 6691084

Neighbor

gene id symbol gene type direction distance location
AMCG00019163 NA coding upstream 21770 6606972 ~ 6668145 (+)
AMCG00019162 pth1r,LOC107671674,LOC106599896,LOC107660418 coding upstream 123422 6485078 ~ 6566493 (+)
AMCG00019160 crhr2,LOC102776588,LOC106599903 coding upstream 309570 6355260 ~ 6380345 (+)
AMCG00019159 crhr2 coding upstream 377795 6311748 ~ 6312120 (+)
AMCG00019156 NA coding upstream 709394 5969442 ~ 5980521 (+)
AMCG00019167 LOC106569335 coding downstream 13273 6704357 ~ 6705892 (+)
AMCG00019168 NA coding downstream 78159 6769243 ~ 6770217 (+)
AMCG00019171 NA coding downstream 132151 6823235 ~ 6832585 (+)
AMCG00019172 NA coding downstream 206734 6897818 ~ 6907983 (+)
AMCG00019173 cdk5,LOC106599847 coding downstream 217049 6908133 ~ 6917381 (+)
G31915 NA non-coding upstream 11527 6678165 ~ 6678388 (+)
G31914 NA non-coding upstream 16738 6672898 ~ 6673177 (+)
G31894 myl13,myl3,LOC107660402,LOC107567878,LOC107711693,LOC107593749 non-coding upstream 253208 6434199 ~ 6436707 (+)
G31893 NA non-coding upstream 272066 6417481 ~ 6417849 (+)
G31879 NA non-coding upstream 426633 6263011 ~ 6263282 (+)
G31930 NA non-coding downstream 638 6691722 ~ 6692280 (+)
G31947 NA non-coding downstream 128681 6819765 ~ 6820035 (+)
G31992 NA non-coding downstream 533548 7224632 ~ 7224997 (+)
G32010 agap3,LOC107383869 non-coding downstream 740596 7431680 ~ 7431944 (+)
G32048 NA non-coding downstream 929420 7620504 ~ 7620812 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 750318 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 2321712 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 3479025 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 3589744 3094452 ~ 3100171 (+)
AMCG00019089 NA other upstream 4071863 2520104 ~ 2618052 (+)
G32005 NA other downstream 729417 7420501 ~ 7421083 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 1654371 8345455 ~ 8384592 (+)
G32286 NA other downstream 2570290 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 2638395 9329479 ~ 9348819 (+)
G32293 armc4 other downstream 2678814 9369898 ~ 9628662 (+)

Expression


Co-expression Network