AMCG00019190


Basic Information

Item Value
gene id AMCG00019190
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 7711655 ~ 7712858 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019190
ATGGCTGACAGGAGTAGTTCATGTGTTTTTGGCAAGTCCTCTCTGTTCTGCCACCGAGTTATGAGCCTGTATTCTTATTGCAGGGATTTAAAGCTGCAGAATCTCCTGCTGGATGGACACGGCTATGTCAAGCTCAGTGACTTTGGCCTGTGCAAGGAAGGGATGGGACTGAATGACCGCACTAGCACCATGTGTGGGACGCCCCAGTTTGTGGCGCCAGAGCTACTGACGGATACGTCCTACACCCGGGCCCTAGATTGGTGGGCCGTGGGCATCCTCCTCTACCAGATGCTGGTTGGCAAGGTCCCATTCAATGGAGCCAATTTCCATGAGCTCGCACACAGGATTGTGCACAATGACGTGAGATACCCACAGTTCCTGTCCACAGACGCAGTGTCCGTCATCACAGGGGTGTGTGCTAGTGCTGTTCTTCCGTGTGACTTCAGTTTGTCCCCCGCTGTCCTGCTGACCAGCCACGATGAAGGTGTGTCACTGGAGAATCACTGGCCTCTCCTTGTTGTTTTGAATCATCCGCAGCTTCTGGAGAAGAACCCCGAGAGGCGCCTGGGGGCCGGGGAGGGAGGCGTGGAGCAGCTGAAGAGCCATTCCTTCTTTGAGGCGAGGAGGGGGATGGCTCACTTTGTGGCCCCCTGCAAGAACCCTGAAGTCCTGGGCCAATCAGCGGACCCCGTCCTCACGCTGCCTCTCgagcacagagccctgactgaGGAAGTGCAGAACCTCTTCACCGACTTTGATTATGTGGGAGATTGGTGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019190 True 780 mRNA 0.56 4 7711655 7712858

Neighbor

gene id symbol gene type direction distance location
AMCG00019187 tmub1,LOC105023792,LOC102788489 coding upstream 9885 7696853 ~ 7701770 (+)
AMCG00019181 gbx1 coding upstream 308511 7400255 ~ 7403144 (+)
AMCG00019180 NA coding upstream 317399 7383439 ~ 7394256 (+)
AMCG00019178 NA coding upstream 331983 7359603 ~ 7379672 (+)
AMCG00019173 cdk5,LOC106599847 coding upstream 794274 6908133 ~ 6917381 (+)
AMCG00019189 NA coding downstream 8982 7721840 ~ 7723326 (+)
AMCG00019188 cul2 coding downstream 25666 7738524 ~ 7760540 (+)
AMCG00019191 NA coding downstream 236640 7949498 ~ 7964176 (+)
AMCG00019192 pard3,LOC101064277,LOC106929164,LOC102309987,LOC102775598 coding downstream 270339 7983197 ~ 7983668 (+)
AMCG00019193 LOC106568841 coding downstream 301674 8014532 ~ 8028727 (+)
G32048 NA non-coding upstream 90843 7620504 ~ 7620812 (+)
G32010 agap3,LOC107383869 non-coding upstream 279711 7431680 ~ 7431944 (+)
G31992 NA non-coding upstream 486658 7224632 ~ 7224997 (+)
G31947 NA non-coding upstream 891620 6819765 ~ 6820035 (+)
G31930 NA non-coding upstream 1019375 6691722 ~ 6692280 (+)
G32113 NA non-coding downstream 458787 8171645 ~ 8171861 (+)
G32235 NA non-coding downstream 1182381 8895239 ~ 8933746 (+)
G32268 NA non-coding downstream 1450785 9163643 ~ 9222509 (+)
G32287 mpp7,LOC106578549 non-coding downstream 1595779 9308637 ~ 9324063 (+)
G32290 NA non-coding downstream 1636991 9349849 ~ 9352655 (+)
G32005 NA other upstream 290572 7420501 ~ 7421083 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 1772058 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 3343452 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 4500765 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 4611484 3094452 ~ 3100171 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 632597 8345455 ~ 8384592 (+)
G32286 NA other downstream 1548516 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 1616621 9329479 ~ 9348819 (+)
G32293 armc4 other downstream 1657040 9369898 ~ 9628662 (+)
G32539 NA other downstream 2691781 10404639 ~ 10409497 (+)

Expression


Co-expression Network