AMCG00019196


Basic Information

Item Value
gene id AMCG00019196
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 8423146 ~ 8423334 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019196
ATGAGTAAATTGTCGTTTCGGGCACGGGCGCTGGACGCTTCCAAGCCACTACCCGTCTTCCGCTGCGAGGACTTACCCGACCTGCACGAATATGCCTCCATTAACCGGGCCGTGCCGCAGATGCCGACAGGGatggagaaagaggaggaaTCGGTACGTTTTGCAGTTCCAGAAACCTACGTTGGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019196 True 189 mRNA 0.56 1 8423146 8423334

Neighbor

gene id symbol gene type direction distance location
AMCG00019199 LOC107565694,LOC107566918 coding upstream 21253 8373800 ~ 8401893 (+)
AMCG00019198 itgb1a,LOC107655695,LOC107653806,LOC107713907 coding upstream 76694 8337221 ~ 8346452 (+)
AMCG00019197 NA coding upstream 100318 8308993 ~ 8322828 (+)
AMCG00019194 nrp1 coding upstream 124380 8289074 ~ 8298766 (+)
AMCG00019193 LOC106568841 coding upstream 394419 8014532 ~ 8028727 (+)
AMCG00019195 NA coding downstream 24546 8447880 ~ 8461935 (+)
AMCG00019201 LOC101470268,LOC102291500,LOC102212547,LOC103361717 coding downstream 74541 8497875 ~ 8521854 (+)
AMCG00019200 NA coding downstream 117279 8540613 ~ 8541305 (+)
AMCG00019202 arhgap12,LOC102789345 coding downstream 154591 8577925 ~ 8606120 (+)
AMCG00019205 NA coding downstream 358447 8781781 ~ 8784939 (+)
G32113 NA non-coding upstream 251285 8171645 ~ 8171861 (+)
G32048 NA non-coding upstream 802334 7620504 ~ 7620812 (+)
G32010 agap3,LOC107383869 non-coding upstream 991202 7431680 ~ 7431944 (+)
G31992 NA non-coding upstream 1198149 7224632 ~ 7224997 (+)
G31947 NA non-coding upstream 1603111 6819765 ~ 6820035 (+)
G32235 NA non-coding downstream 471905 8895239 ~ 8933746 (+)
G32268 NA non-coding downstream 740309 9163643 ~ 9222509 (+)
G32287 mpp7,LOC106578549 non-coding downstream 885303 9308637 ~ 9324063 (+)
G32290 NA non-coding downstream 926515 9349849 ~ 9352655 (+)
G32321 LOC103376870 non-coding downstream 1269935 9693269 ~ 9750270 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 38554 8345455 ~ 8384592 (+)
G32005 NA other upstream 1002063 7420501 ~ 7421083 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 2483549 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 4054943 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 5212256 3190612 ~ 3210890 (+)
G32286 NA other downstream 838040 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 906145 9329479 ~ 9348819 (+)
G32293 armc4 other downstream 946564 9369898 ~ 9628662 (+)
G32539 NA other downstream 1981305 10404639 ~ 10409497 (+)
G33159 LOC103376870 other downstream 6015919 14439253 ~ 14486706 (+)

Expression


Co-expression Network