AMCG00019200


Basic Information

Item Value
gene id AMCG00019200
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 8540613 ~ 8541305 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019200
ATGGCCGACAAGGACAGCAAGTGCGAGTTGCCCATTGCCCCTGGGCAGGTCTACATCGAGGTTGAGTATGACTATGAGTACAAGGCCAAAGACCGGTTCATCACCATCAAGCAGGGGGACTGTTACATCCTGGTGAGGAAGACCAACGACGACTGGTGGCAGGTGAAGAAGGATGAAAACGCCAAGCCCTTCTATGTGCCGGCGCAGTATGTGAAGGAAGTTCGCAAGGCGCTCATGCCTCCACAGAAACCCCTGCCCTCCAGAGGGTCTGGGAAGACCAAACCCAAGGCGTTGGACATCAAGCCCCTGCAGAGGTCCAACGAGAATCTGTCCAAAACCCAGGAGCTGTCGAGCTTCGGGCGCCACCCCCCGGGGCACATCACGCCCCCGGCCCTTCCCAGGGACGCCAACCAGAACTTGGGCAGCCCCGGGCAGAGCAAGAGCCTGGCCGACCACTTGCAGAACAATAACACCGGCTCCACTCTCCCGCGGGCGCGCGCTGATTCGCCACCCCCAAGGCTGCCCAATCACAGCAGGTCTCCCATGATCGGACGGAGGCCCCCGCTGGACCTGGATGCTGACCGGACCCCCCCGCACTGCGACTCCGCTGGGGAGGGCTCTGAACAGCACCGCAACGACTCGGAGTCGGGGGATGACCTCAGTAGCAGCTCCACGGAGCACATGCAGGTATGA

Function

GO:

id name namespace
GO:0050790 regulation of catalytic activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019200 True 693 mRNA 0.62 1 8540613 8541305

Neighbor

gene id symbol gene type direction distance location
AMCG00019201 LOC101470268,LOC102291500,LOC102212547,LOC103361717 coding upstream 18759 8497875 ~ 8521854 (+)
AMCG00019195 NA coding upstream 78678 8447880 ~ 8461935 (+)
AMCG00019196 NA coding upstream 117279 8423146 ~ 8423334 (+)
AMCG00019199 LOC107565694,LOC107566918 coding upstream 138720 8373800 ~ 8401893 (+)
AMCG00019198 itgb1a,LOC107655695,LOC107653806,LOC107713907 coding upstream 194161 8337221 ~ 8346452 (+)
AMCG00019202 arhgap12,LOC102789345 coding downstream 36620 8577925 ~ 8606120 (+)
AMCG00019205 NA coding downstream 240476 8781781 ~ 8784939 (+)
AMCG00019206 NA coding downstream 505613 9046918 ~ 9055856 (+)
AMCG00019214 NA coding downstream 815793 9357098 ~ 9376745 (+)
AMCG00019212 wu:fc01d11,LOC107657783,LOC107554911,LOC107732095 coding downstream 865996 9407301 ~ 9414186 (+)
G32113 NA non-coding upstream 368752 8171645 ~ 8171861 (+)
G32048 NA non-coding upstream 919801 7620504 ~ 7620812 (+)
G32010 agap3,LOC107383869 non-coding upstream 1108669 7431680 ~ 7431944 (+)
G31992 NA non-coding upstream 1315616 7224632 ~ 7224997 (+)
G31947 NA non-coding upstream 1720578 6819765 ~ 6820035 (+)
G32235 NA non-coding downstream 353934 8895239 ~ 8933746 (+)
G32268 NA non-coding downstream 622338 9163643 ~ 9222509 (+)
G32287 mpp7,LOC106578549 non-coding downstream 767332 9308637 ~ 9324063 (+)
G32290 NA non-coding downstream 808544 9349849 ~ 9352655 (+)
G32321 LOC103376870 non-coding downstream 1151964 9693269 ~ 9750270 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 156021 8345455 ~ 8384592 (+)
G32005 NA other upstream 1119530 7420501 ~ 7421083 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 2601016 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 4172410 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 5329723 3190612 ~ 3210890 (+)
G32286 NA other downstream 720069 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 788174 9329479 ~ 9348819 (+)
G32293 armc4 other downstream 828593 9369898 ~ 9628662 (+)
G32539 NA other downstream 1863334 10404639 ~ 10409497 (+)
G33159 LOC103376870 other downstream 5897948 14439253 ~ 14486706 (+)

Expression


Co-expression Network