AMCG00019206


Basic Information

Item Value
gene id AMCG00019206
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 9046918 ~ 9055856 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019206
CACGCCGTGACGCAGGGATGCGCCGATATTAGCTGCGGGGCGGAGAGGCGCCCCAGCAATGCGGGCTGGGATGCTACTGTACAAAACTAGCTGAAAGAGCTGTGAAGGACAGGCAGCACCATGGAGtacatgaatgaaaatgtggGGATACAACTTCTGCTGATGCGCATGAAACTGGAGAGCTGCATTGGGGCATATGACATTGAAGAAGTAGATTTATCTGAAGGAAGCCTCACCCAGGACGAAATGGACGAAAATGAAGAAATTACAGACTCTTTAGTGCTGGATGAAAGTAAGCACGGTCTTCTGCACGACAGGGTCGGTTATGGATCTGTGAATGAGCTGCTCTCTTTTGCTAATGTGGTGTCAGACGATCCACAAGTTTTGCACAAACACCAGTTGCAAGAAATTGGCGTTCTGTTAAACAAGAAGGATATGCTGGTACGAGATGGACGTTATCGCATCGGCTTGGACGTGTTTCTGTTCCCATGGAAGTACACCTACAGCAACCCTGGCTCGGGTCATGTTCCTAAAGGGTCTTTTGGCAAAGTACACCTGGCTCAGGACACAGAAACCAGAAAACGAATGGCATGTAAACTTATTCATGTCGAGCACTTCAAACCGGCTGACGTGGAAATCCAGGCGCGCTTCCGTCATGAGAACATCGCGGAGCTGTACGGGGCTTTGCTGTGGGACCAGACCATTTACCTGTTCATGGAGGCTGGAGAGGGGGGCTCTGTGCTCGAGAAGTTGGAGAGCTGTGGCCCAATGAGAGAATTTGAAATCATCTGGGTCACCAAGCAGGTGCTGAAAGCTCTGGAGTACCTTCATTCCCAGAATGTCATACACCACGACATCAAACCCAGCAACATTGTCTTGATGTCAACCAAAGCTGTTCTGGTGGATTTTGGATTGGCTGTGCAAATGACAGAAGATGTGTACAAACCAAGAGATCTTCGAGGGACAGAAATGTACATGAGCCCGGAAGTGGTCCTTTGCAGAGGTCACACGACGAAGGCAGACATTTATAGCCTGGGCACCACTGTCATTCACATGCAGACCGGCAGCCCACCCTGGGTGAAGAGATACCCGCGGTCTGCCTATCCCTCCTACTTGTACATAATCCACAAGCAGGCCCCGCCTCTGGAGGACATTGCGGAGGACTGCAGTCCGGCCATGAGGAGGTTCCTGGTGGGCGCTCTGGAGAGGAACCCTGCCCAGCGACACTCTGCAGCGGAGCTCCTGAGAGACGAGGCTATAAACCCGCCCCGGGAGGACCAGCCGCGCTGCTGGAGCCTGGACTCCGCTATGTGTGAGGGGACGCACCCCATGCTGCGCCAGCACAGCCAGCTGCCCGACACCACCCAGGATTCATCTTTGTACAGCAATGAAGATTCTGTCCCCCAAAAGAGACAGGGATCGTTGTACATCGACCTGGGGGCACTGGCAGGTTATTACAACATAGTAAGGGGACCCCCAGCATCCGAATATGGCTAACAGCTCACCACTGCCTCACGCTAGTTCAAGGCCGTGTCTGTGGATTACACAGGAAGTGCAAATTAATTGGAAGATGGGACTCCAGGTGATTTACTGATGAAATAATGTGATCGTCCTCATTAGCAGGGTATTACTCCTCAGTGTACAAACTCTGTTATTTGCCCACAGTGAACGAGCTGGACTTGGGATTGGGAGTAATGTTATTATGGAATTGAAATTGAGATAGCAGTATGTACTCAAAGAAGTGTTAAAGCCTGTAAACAAGGACAAACCAAGAATAATAAACAGGTGAGACTGAAACCATAGTCAGGGGATAACCTGTTTTTAGTTGTAATAGTAATGACGCTCACGAATATCTGATGATGTATGAtctatgaatacatacatattccaaaaatatgtttctaatAGAAATGATTCACATGATTGGCGGTGTATGAGAAGGCTTTAGTATTTACCTAACAAAATGTCTTACCAGTCTACTTATTTACTAAATACAGGTTTTAGCTTGTATTTGTTTCTACAGATTCCTATGGAAACAGTTATTGCTAGTAATTGCTATGCAGGTTAACCAATATCTATGTTTATTGTGTGAACTATTTGTGTAATGTCTATTGGTTTTGTAACTTTTAATTGTACATCCAGTGAGATGAAATGAAATGTGCCCTTAACAATTGTTCACATATGTgatttgaataaatgtatttcacatttacattatacaa

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04415 MAP3K8, COT; mitogen-activated protein kinase kinase kinase 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019206 True 2222 mRNA 0.47 8 9046918 9055856

Neighbor

gene id symbol gene type direction distance location
AMCG00019205 NA coding upstream 261979 8781781 ~ 8784939 (+)
AMCG00019202 arhgap12,LOC102789345 coding upstream 440798 8577925 ~ 8606120 (+)
AMCG00019200 NA coding upstream 505613 8540613 ~ 8541305 (+)
AMCG00019201 LOC101470268,LOC102291500,LOC102212547,LOC103361717 coding upstream 525064 8497875 ~ 8521854 (+)
AMCG00019195 NA coding upstream 584983 8447880 ~ 8461935 (+)
AMCG00019214 NA coding downstream 301242 9357098 ~ 9376745 (+)
AMCG00019212 wu:fc01d11,LOC107657783,LOC107554911,LOC107732095 coding downstream 351445 9407301 ~ 9414186 (+)
AMCG00019217 armc4 coding downstream 570554 9626410 ~ 9628658 (+)
AMCG00019218 armc4 coding downstream 598470 9654326 ~ 9663886 (+)
AMCG00019219 mkx,LOC107665863,LOC103377095,LOC106578547 coding downstream 621804 9677660 ~ 9714621 (+)
G32235 NA non-coding upstream 113172 8895239 ~ 8933746 (+)
G32113 NA non-coding upstream 875057 8171645 ~ 8171861 (+)
G32048 NA non-coding upstream 1426106 7620504 ~ 7620812 (+)
G32010 agap3,LOC107383869 non-coding upstream 1614974 7431680 ~ 7431944 (+)
G31992 NA non-coding upstream 1821921 7224632 ~ 7224997 (+)
G32268 NA non-coding downstream 107787 9163643 ~ 9222509 (+)
G32287 mpp7,LOC106578549 non-coding downstream 252781 9308637 ~ 9324063 (+)
G32290 NA non-coding downstream 293993 9349849 ~ 9352655 (+)
G32321 LOC103376870 non-coding downstream 637413 9693269 ~ 9750270 (+)
G32324 NA non-coding downstream 662166 9718022 ~ 9718564 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 662326 8345455 ~ 8384592 (+)
G32005 NA other upstream 1625835 7420501 ~ 7421083 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 3107321 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 4678715 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 5836028 3190612 ~ 3210890 (+)
G32286 NA other downstream 205518 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 273623 9329479 ~ 9348819 (+)
G32293 armc4 other downstream 314042 9369898 ~ 9628662 (+)
G32539 NA other downstream 1348783 10404639 ~ 10409497 (+)
G33159 LOC103376870 other downstream 5383397 14439253 ~ 14486706 (+)

Expression


Co-expression Network