AMCG00019208


Basic Information

Item Value
gene id AMCG00019208
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 9033791 ~ 9044972 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019208
GTCAGCTAGCTTTGGGCATGCGCATTACTTTGCATGCCTAGCGCAGCAATGGCGGCCTCCTTGTGGATGTGCAGGTTATATTTGAGAGGACGGAGGGGTCCGTTAAGAAGCATAGAGAAGTCAAACCTGAGGTTTCGGAGCAGCACTAGTACGAGCAGTGTTGCGCTAAAAAGCGAAGCAACACACAGGAGTGACGAATCTGAAGCCATTGATGAAAGAAAATCATTTTACACACTGCTGGAGGAAAGACAAGCGCAGTCTGAGAGATCTGTTCTTATAAGTTGTCCCCCCAAAATCAatgagaatattttttttaaatacctgtCAAGACATGGAGAAATCAATACCTGTTTCTTCTATGAAAGCTTTGGTGTATATGCCGTGGTGGAATTTTCCAAGAAAGAAAGTGTCGCCTCACTTCATGATGGAATCGGCATCCCGAGTTTCCAGAATGAGGCAACTGTGCCTTTCAAATCTCGACTGGTTTCGTTGAGGCTGAATAATCCTGCTAACCAGACCAATTCCCAGCCAGCTGTCCAGTGCCTAAAACAGTCTTCCATTCCCATCAATGAGCTTATTCAGAAAATTTCAAAAGTAGACAGCATAGACCAACAATTACACACTCTTATGAATGTCTACCAGTTAACAGATGAAAACATCCGTCTGCGTTTCTTGGTTTGTTCTTTACTGAAAGACATTGCAGCAGCATATTTCCCAGAATGCTCCATAATGCCATTTGGCTCCACAGTAAATGGTTTTGGGAAGCTTGGCTGTGATTTGGATATGATTCTGGATCTGGATCGCATCCGTGGCAGGAACTTAAAGgCTGCTGGTCCCTTTTCCTTGGAGTACCAGATGAAGAGGGTGTCTTCTGAGAGATCTGTAACCCAGAGGATCCTGTCAGTGATGGGAGAGTGCATTGATGAGTTTGGTCCTGGGTGTGTTGGAGTGCAGAAGATCCTCAATGCTCGCTGTCCTCTATTGCGTTTTTCCCACCAGCCCTCTGGCTTCCAGTGTGACCTCACAGCCAATAACAGGGTGGCTGTGAAAAGTTCGGAACTGCTGTTCCTCTATGGCAGCCTGGACCCGCGGGTGCGTCCCCTGGTGTTCAGTGTGCGCTGCTGGGCCCGAGTGCATGGTATCACCAGCAGCATCCCGGGGGCCTGGCTCACAAACTTCTCCCTCACCATGATGGTCATGTTCTTTCTGCAGAGGAGAAGCCCCCCCATCATTCCCACCCTAGACCAGCTGAAAAATCTTGCAGGTCCTGAGGATAAAAGTGTAATTGAAGGGAATGATTGCACTTTTGTGAGGGACATCAGCAAGATCAAAGCTCAGGAGAACACCGAAACATTAGGGCATCTTCTCCAAGAATTCTTTGAATTCTATGGCAATTTTGCCTTTAGTAAACTGTCCATCAACATCAGAAAGGGTAAGGAACAGAACAAACCAGAGACCTCCCCACTGCACATCCAGAATCCCTTCGAGCCGTCGCTCAACGTGAGCAAGAACGTGAACATGACGCAGATGGAGAGGTTCGTGGCCCTGGCCCAGGAGAGCGCCTGGGTTCTACAGCAGGCCGGAGGAAAGGGCCCCACAGGGACCAGGGACCAGCCGTGGGGCCTGGCTTCTTTGCTCCTGCCCTCTATTTCGCAGGCCGGAGGAAAGAGTAAAAAGAAGAGGAAGATGGAGCCGGCCAGTCAGAGGATAAAGAGCCTCCTGGAATCGCTAAAGACTAACAAATCACAGGGCAACAGTACAGAGAAGAATAAGAGGACTGTTTCTTCCAGTTCCCACTAGAGGGCGCTGTGCCAAAAGCTTGGGCTTTCAAGACCCACTGTAGAATATACATCTGAAAGGATGGGAGTGGTGCCCAAGGGAACACAGGGTTCCCATCATCTCAACAACAAAGAGGACCTTTTTCAGTGCAGTCAGACGGCTCCGCGCCTTTACTGGACGAGTTTACATAGACATGCAGAAATAAACTACCCAATTCAAATGTAACCCTCATAtttggatgtttttcttttccttttgagtttttttttttctaaactttgTGCACAAACAGTGATGCACATGtgcttgtattttaaacatgtatatttagaCATGTCTTTATATCGAACAGTACAAAAATATGACCTTTACTACTTTAACTCTCCATCTGGATATGGTGAATGTACTTAGACCTATAATGAATATTTGTGTGAAggttaaaatacaacaatggCCATGAACAGTGTAAGGCAAACATTCATCATGGATATATAAACCCCTTTGCTTTTATTAAACCTTGGTTAGTGTGATTCATCAAACCACTCTTTCTAGTGACTGAAAGGCATTACTTGAAATTACCTATTAAAGTGctctttagaaaaataaaaacagtaattgaATATGTACCTGAGTCATCCTATGCGGTTTACAAACGTTTTATGTCTGACACATTCCCTTCTTAAGTAATTCACCCATTCCAAAAGATTACATAATTGTTGCTCGTATGTGAAGGGTTCTTGGATTATGATTGGCAATTGTGTGACACCCACCCGATATATAAAGGACATGTGTGAGGAAGGtctgga

Function

GO: NA

KEGG:

id description
K18060 MTPAP; poly(A) RNA polymerase, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019208 True 2585 mRNA 0.45 9 9033791 9044972

Neighbor

gene id symbol gene type direction distance location
AMCG00019207 NA coding downstream 49095 8968886 ~ 8984696 (-)
AMCG00019203 NA coding downstream 370844 8636550 ~ 8662947 (-)
AMCG00019204 NA coding downstream 397243 8627014 ~ 8636548 (-)
AMCG00019186 NA coding downstream 1426416 7599869 ~ 7607375 (-)
AMCG00019184 agap3,LOC107383869,LOC102197517 coding downstream 1534248 7480093 ~ 7499543 (-)
AMCG00019210 bambi,LOC106578551,LOC106590018 coding upstream 164368 9209340 ~ 9214704 (-)
AMCG00019211 wac coding upstream 178318 9223290 ~ 9250326 (-)
AMCG00019216 NA coding upstream 450410 9495382 ~ 9549803 (-)
AMCG00019220 rab18,LOC106578546,LOC107566717,LOC106590026,LOC107708473,LOC107681801 coding upstream 669460 9714432 ~ 9726715 (-)
AMCG00019224 LOC106590299 coding upstream 691295 9736267 ~ 9747253 (-)
G32144 NA non-coding downstream 658387 8338036 ~ 8375404 (-)
G32096 NA non-coding downstream 1061566 7971193 ~ 7972225 (-)
G32076 cul2 non-coding downstream 1275564 7755253 ~ 7758227 (-)
G32061 NA non-coding downstream 1330715 7702842 ~ 7703076 (-)
G32057 NA non-coding downstream 1346622 7673755 ~ 7687169 (-)
G32351 NA non-coding upstream 304877 9349849 ~ 9352652 (-)
G32586 NA non-coding upstream 1923157 10968129 ~ 10968403 (-)
G32587 NA non-coding upstream 1923545 10968517 ~ 10968773 (-)
G32635 NA non-coding upstream 2073736 11118708 ~ 11119507 (-)
G32693 NA non-coding upstream 2551844 11596816 ~ 11600671 (-)
AMCG00019209 LOC106600477 other downstream 131913 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 2349490 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 4047407 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 4093124 4932349 ~ 4940667 (-)
AMCG00019109 NA other downstream 4803800 4220443 ~ 4229991 (-)
AMCG00019213 NA other upstream 206180 9251152 ~ 9434114 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 2807136 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 3368182 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 4123464 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 4617144 13662116 ~ 13665230 (-)

Expression


Co-expression Network