AMCG00019215 (mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300)


Basic Information

Item Value
gene id AMCG00019215
gene name mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 9329479 ~ 9348819 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019215
ATGGTTTGCTACAACTGCCAGGATGATCCTGTACCTTTCAGCACCATGGCTCTGAAAGTGCTATCTGGATTGCGGAGAAGCTTCCGTCTCAGCAGAAGAGACCGGAAGACCAACAAGTCCATGTATGAGAGCAAGAAGAGTGAGCTGTACGACATGGCTGACGTCCCCACATATGAAGAGGTGACCACCTACCGCAGACAGCATGGAGAGAAGTACAGACTGGTGGTTCTGGTTGGACCCACTGGAGTTGGTTTGAATGAGCTGAAAAGGAAGCTCCTCATTTCCGACCCCCAGCACTACAGTGTGACTGTTCCACACACAACCAGAGCCAAACGGAGCCAGGAGAGCGATGGAGTGGAGTATCACTTTATCTCGAAACACTTGTTTGAGACTGATGTTCAAAACAACAAGTAG
>TU40432
TGACCCATTGTTGTCCTAGTGTAGTGTTTCTGTCAGAGATGGAAGACGTGCTTCTTTGTCCTAAGCTGCTCCTTTTTGATGTTTTGTCTTTTGCCAACTGTGTATTGGAATTAGGGAGTTCATTACTGTAGCCAAAACcaaataatctgttttattctttactcTTCTTGTTAATTTACATCAGGTCTCCTGACCTCTCTGTGACATCGTGTAACAGATAATTTAGTGCTGCCTGGAAGCTTCATAAGTATTCATTTCACATATAGTGtggttttgatttattgttccaccagtaaaaaaataaataaaaaaggttacaGTTATAAATATCTTTGGAACGAGCCATCGTCTCACACAGGGTAGTTAAGATCTCTGTGTTTCAGGCCAGGACATTCAgccctttatttgtttatagtttttcttttataacaCTATATTCTAACTGTTGTACTGTATAACTTCCTTACGGACCTAAGAGAAGGTGTGGTAGGTTTACCAGGGTTGCTCACTTTGTCTCTGAATTTGTCTCGGCTTCTAACTTTTCTGCTTCTCTTCTGGGCTTATGTTCCTCTGTTTGTGCTTTTACACTGTAACCAGAAGATGCTGAATATGGTGCCTATATAAGCGGACTCTACATAGCTGGATTGCGGAGAAGCTTCCGTCTCAGCAGAAGAGACCGGAAGACCAACAAGTCCATGTATGAGAGCAAGAAGAGTGAGCTGTACGACATGGCTGACGTCCCCACATATGAAGAGGTGACCACCTACCGCAGACAGCATGGAGAGAAGTACAGACTGGTGGTTCTGGTTGGACCCACTGGAGTTGGTTTGAATGAGCTGAAAAGGAAGCTCCTCATTTCCGACCCCCAGCACTACAGTGTGACTGTTCCACACACAACCAGAGCCAAACGGAGCCAGGAGAGCGATGGAGTGGAGTATCACTTTATCTCGAAACACTTGTTTGAGACTGATGTTCAAAACAACAAGTAGGTATTGTACAACACAGCAGACGGTAGATAAAGGTGAATCAGTCAGGCACATTTGTGCATGataacatttactttattaatacaGAATATCACTTTAATAAAGGAATAATATTCTAATCTTAATGAGTTACATTGTGAAGAAGAGGACCATGTCAGTCCATCTGCGGTGCATGAGTGTG

Function

symbol description
mpp7 Enables molecular adaptor activity and protein domain specific binding activity. Involved in bicellular tight junction assembly; positive regulation of protein-containing complex assembly; and protein localization to adherens junction. Located in adherens junction; bicellular tight junction; and nucleoplasm. Part of MPP7-DLG1-LIN7 complex.

NR:

description
PREDICTED: MAGUK p55 subfamily member 7 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019215 False 414 mRNA 0.50 4 9336645 9348641
TU40432 True 1167 TUCP 0.41 4 9329479 9348819

Neighbor

gene id symbol gene type direction distance location
AMCG00019206 NA coding upstream 273623 9046918 ~ 9055856 (+)
AMCG00019205 NA coding upstream 544540 8781781 ~ 8784939 (+)
AMCG00019202 arhgap12,LOC102789345 coding upstream 723359 8577925 ~ 8606120 (+)
AMCG00019200 NA coding upstream 788174 8540613 ~ 8541305 (+)
AMCG00019201 LOC101470268,LOC102291500,LOC102212547,LOC103361717 coding upstream 807625 8497875 ~ 8521854 (+)
AMCG00019214 NA coding downstream 8279 9357098 ~ 9376745 (+)
AMCG00019212 wu:fc01d11,LOC107657783,LOC107554911,LOC107732095 coding downstream 58482 9407301 ~ 9414186 (+)
AMCG00019217 armc4 coding downstream 277591 9626410 ~ 9628658 (+)
AMCG00019218 armc4 coding downstream 305507 9654326 ~ 9663886 (+)
AMCG00019219 mkx,LOC107665863,LOC103377095,LOC106578547 coding downstream 328841 9677660 ~ 9714621 (+)
G32287 mpp7,LOC106578549 non-coding upstream 5416 9308637 ~ 9324063 (+)
G32268 NA non-coding upstream 106970 9163643 ~ 9222509 (+)
G32235 NA non-coding upstream 395733 8895239 ~ 8933746 (+)
G32113 NA non-coding upstream 1157618 8171645 ~ 8171861 (+)
G32048 NA non-coding upstream 1708667 7620504 ~ 7620812 (+)
G32290 NA non-coding downstream 1030 9349849 ~ 9352655 (+)
G32321 LOC103376870 non-coding downstream 344450 9693269 ~ 9750270 (+)
G32324 NA non-coding downstream 369203 9718022 ~ 9718564 (+)
G32325 NA non-coding downstream 370220 9719039 ~ 9726753 (+)
G32418 NA non-coding downstream 461065 9809884 ~ 9812637 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 944887 8345455 ~ 8384592 (+)
G32005 NA other upstream 1908396 7420501 ~ 7421083 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 3389882 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 4961276 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 6118589 3190612 ~ 3210890 (+)
G32293 armc4 other downstream 21079 9369898 ~ 9628662 (+)
G32539 NA other downstream 1055820 10404639 ~ 10409497 (+)
G33159 LOC103376870 other downstream 5090434 14439253 ~ 14486706 (+)
G33283 NA other downstream 5815529 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 6206000 15554819 ~ 15626955 (+)

Expression


Co-expression Network