AMCG00019217 (armc4)


Basic Information

Item Value
gene id AMCG00019217
gene name armc4
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 9626410 ~ 9628658 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019217
ATGGTGAAAATATTAGATTCCCCAGATAAGGACCTCAAATGTCTAGCTGCAGAGACAATCGCTAATGTGGCCAAGTTTAGAAGGGCAAGAAGGACAGTACGACAGCATGGAGGAATAAAGAGACTTGTGGAACTGCTGGACTGTGTCCCCGAAGACTCTGCCACCCTGACTCCTGAGCAGGAGAAAGACATCGAGGTGGCGCGGTGTGGTGCCCTGGCATTGTGGAGCTGCAGTAAGAGCCCCAGGAACAAAGAAGCCATTCGCAAAGCGGGGGGCATTCCACTGCTAGCTCGGCTCCTGAAATCACCTCATGAAAACATGCTGATCCCAGTAGTCGGTACACTGCAGGAATGTGCTTCTGAgCAAAGATACAGGGTTGCGATTCAGACTGAAAAAATGATTGAAGACCTGGTGAAAAATCTTAATTGTGATAACCAGGAACTTCAAATGCATTGTGCCAGTGCTATCTTTAAGTGCGCAGAAGACAAGAAAACACGTGACCTTGTCAGACAGTATGAGGGGCTTCAGCCTTTGGTTTCTCTTCTGAACATGTCTGAGAACAAGCAACTCTTAGCTGCTACAACTGGAGCTATCTGGAAATGTTCCATCAGCATGGAGAATGTTGTG

Function

symbol description
armc4 armadillo repeat-containing protein 4

NR:

description
PREDICTED: armadillo repeat-containing protein 4

GO:

id name namespace
GO:0061371 determination of heart left/right asymmetry biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019217 True 627 mRNA 0.48 4 9626410 9628658

Neighbor

gene id symbol gene type direction distance location
AMCG00019212 wu:fc01d11,LOC107657783,LOC107554911,LOC107732095 coding upstream 212224 9407301 ~ 9414186 (+)
AMCG00019214 NA coding upstream 249665 9357098 ~ 9376745 (+)
AMCG00019206 NA coding upstream 570554 9046918 ~ 9055856 (+)
AMCG00019205 NA coding upstream 841471 8781781 ~ 8784939 (+)
AMCG00019202 arhgap12,LOC102789345 coding upstream 1020290 8577925 ~ 8606120 (+)
AMCG00019218 armc4 coding downstream 25668 9654326 ~ 9663886 (+)
AMCG00019219 mkx,LOC107665863,LOC103377095,LOC106578547 coding downstream 49002 9677660 ~ 9714621 (+)
AMCG00019227 NA coding downstream 103532 9732190 ~ 9745637 (+)
AMCG00019222 NA coding downstream 159703 9788361 ~ 9792594 (+)
AMCG00019221 LOC107687524 coding downstream 184732 9813390 ~ 9824416 (+)
G32290 NA non-coding upstream 273755 9349849 ~ 9352655 (+)
G32287 mpp7,LOC106578549 non-coding upstream 302347 9308637 ~ 9324063 (+)
G32268 NA non-coding upstream 403901 9163643 ~ 9222509 (+)
G32235 NA non-coding upstream 692664 8895239 ~ 8933746 (+)
G32113 NA non-coding upstream 1454549 8171645 ~ 8171861 (+)
G32321 LOC103376870 non-coding downstream 64611 9693269 ~ 9750270 (+)
G32324 NA non-coding downstream 89364 9718022 ~ 9718564 (+)
G32325 NA non-coding downstream 90381 9719039 ~ 9726753 (+)
G32418 NA non-coding downstream 181226 9809884 ~ 9812637 (+)
G32437 apbb1ip non-coding downstream 288662 9917320 ~ 9920036 (+)
G32286 NA other upstream 87199 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 277591 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 1241818 8345455 ~ 8384592 (+)
G32005 NA other upstream 2205327 7420501 ~ 7421083 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 3686813 5930704 ~ 5939597 (+)
G32539 NA other downstream 775981 10404639 ~ 10409497 (+)
G33159 LOC103376870 other downstream 4810595 14439253 ~ 14486706 (+)
G33283 NA other downstream 5535690 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 5926161 15554819 ~ 15626955 (+)
G33406 NA other downstream 6415284 16043942 ~ 16081943 (+)

Expression


Co-expression Network