AMCG00019227


Basic Information

Item Value
gene id AMCG00019227
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 9732190 ~ 9745637 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019227
ATGTCTAATGATAAGATCTACGCCTCCCGCTCCTTTATTCTGACTGTGAACATCACCAGTGCAGTTGATgaaaagaatatgttgaacgaGCTGAGAGACACTGCGAAGAACTGTCCCATCCCTCTGCTGGTTTATCATCCTGCTTTTATCTACTACGATCAGTATGCAGTCATAGTTGACAACACCATCCAGAACATCGGGGTGGCCACTGCTGTGATGCTGCTGATTTCCCTCCTGTTGATTCCCAACCCTCTTTGCTCTCTGTGGGTGACGTTTGCCATTGGCTCTGTCATTGTGGGGGTGGCTGGTTTCATGTCATTGTGGGATGTTAACTTAGACTCCATATCCATGATCAACCTTGTCATCTGCATTGGCTTCTCTGTAGACTTCTCTGCACACATTTCCTATGCCTTTGTCTCAAGTACTAAACCCAATGTCAATGACAAAGTTGTTGAAGCGCTCTGCAATCTGGGTTATGCAATAGTGCAGGGAGCCGTCTCCACCATACTGGGGGTGGTGGTGCTGGCGGCAGCCAAAGCCTACATCTTCAGAACCTTTTTTAAGATCATGTTCATGTGCCCTTCTTGGGCCTATTTCTACAAACACTACATTCTTGTCTTTGGCCGCAAATCTCACTGCCTGCTCAAATTCAACGGGTTCTCTAATGTTCCTGGCCCAATATTCGCCTGGGACTGTGAAATGGCGATTTGTGGAGGTGTCAATTGCATCATTGAGCCTCAAGTTTTTGTTGCTCTcagcaaagcaaaaatggtCTCGCCTGATGGCACCAGCAAACCCTTCTCCAGCAAAGCAGATGGCTATGGAAGAGGGGAAGGCTGTGGAGTTGTCTTACTTAAGCCACTGGAAAAGGCTAAGAAGGATTTTGACCATGTGTGGGGCATCATAAGCAGCACTGCCATTAATCAAGATGGCCGCACAGTCACTCCAATCACCAAGCCCTCCATGACTCAACAGGAGGAACTGCTGAAAACCATTTACTGTCGACAGATTGACCCTTCACATGTCCAATATGTAGAGGCTCATGGGACAGGAACCCCTGTAGGTGACCCCACAGAAGCAGGCAGCATCTCCAGCATCATTGCCAAAGCCCAACCCCAAGGATCACCAGCTCTTTACATCGGCTCTGTGAAAGCCATCTGCTTTACTGGAGAAGGGTTTGCTGGTGCCTTCAGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019227 True 1197 mRNA 0.48 5 9732190 9745637

Neighbor

gene id symbol gene type direction distance location
AMCG00019219 mkx,LOC107665863,LOC103377095,LOC106578547 coding upstream 17569 9677660 ~ 9714621 (+)
AMCG00019218 armc4 coding upstream 68304 9654326 ~ 9663886 (+)
AMCG00019217 armc4 coding upstream 103532 9626410 ~ 9628658 (+)
AMCG00019212 wu:fc01d11,LOC107657783,LOC107554911,LOC107732095 coding upstream 318004 9407301 ~ 9414186 (+)
AMCG00019214 NA coding upstream 355445 9357098 ~ 9376745 (+)
AMCG00019222 NA coding downstream 42724 9788361 ~ 9792594 (+)
AMCG00019221 LOC107687524 coding downstream 67753 9813390 ~ 9824416 (+)
AMCG00019237 abi1a coding downstream 127948 9873585 ~ 9884570 (+)
AMCG00019236 NA coding downstream 148224 9893861 ~ 9905733 (+)
AMCG00019234 NA coding downstream 194189 9939826 ~ 9947046 (+)
G32325 NA non-coding upstream 5437 9719039 ~ 9726753 (+)
G32324 NA non-coding upstream 13626 9718022 ~ 9718564 (+)
G32290 NA non-coding upstream 379535 9349849 ~ 9352655 (+)
G32287 mpp7,LOC106578549 non-coding upstream 408127 9308637 ~ 9324063 (+)
G32268 NA non-coding upstream 509681 9163643 ~ 9222509 (+)
G32418 NA non-coding downstream 64247 9809884 ~ 9812637 (+)
G32437 apbb1ip non-coding downstream 171683 9917320 ~ 9920036 (+)
G32490 NA non-coding downstream 363269 10108906 ~ 10109150 (+)
G32549 LOC103376870 non-coding downstream 717526 10463163 ~ 10508063 (+)
G32671 NA non-coding downstream 1632319 11377956 ~ 11448251 (+)
G32293 armc4 other upstream 103528 9369898 ~ 9628662 (+)
G32286 NA other upstream 192979 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 383371 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 1347598 8345455 ~ 8384592 (+)
G32005 NA other upstream 2311107 7420501 ~ 7421083 (+)
G32539 NA other downstream 659002 10404639 ~ 10409497 (+)
G33159 LOC103376870 other downstream 4693616 14439253 ~ 14486706 (+)
G33283 NA other downstream 5418711 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 5809182 15554819 ~ 15626955 (+)
G33406 NA other downstream 6298305 16043942 ~ 16081943 (+)

Expression


Co-expression Network