AMCG00019233


Basic Information

Item Value
gene id AMCG00019233
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 9981736 ~ 10034056 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019233
cTTTGCAATGGTGGATCTGTTACAGATCTTGCAAAAGGTTTGCTGAAGCGAGGAGACAGAATGGACGAACCGATAATTGCCTACATCTTACATGAAGCCCTTATGGGTCTTAAGCATTTACATGATAACAAGACCATCCATCGTGACGTCAAGGGCAATAACATCCTACTAACAACGGAGGGAGGAATTAAGCTTGTGGATTTTGGTGTTTCTGCCCAACTGACAAACACTCGCCTCCGCAGAAATACTTCAGTGGGAACACCTTTTTGGATGGCACCAGAGgtaATTGCATGTGAGCAGCAATTAGATTCTACTTATGATGCTCGATGTGATGTGTGGTCGCTTGGTATTACTGCTATTGAGCTAGGAGATGGAGACCCACCACTTGCTGACCTGCATCCTATGAGAGCTCTCTTTAAAATACCAAGAAACCCACCTCCAACCCTTCACCAACCAGAGCTGTGGTCTGCCGATTTCAATGACTTTATTTGCAAATGCTTAATTAAGGACTTTGAGCAGCGGCCTAACGTTCCAGATCTTCTGCAGCATGCCTTTATCAAACAAATtgtgggaaaagaaaaaatcctaCAAAAGCAGCTGATGGAACTCATCGACCTCCACCAGCAAATGGGAATCATTGAGAAGACAAGACATGAACGCATTCATACCAAGAAAGGCAGCTACATGAAGTCCGTAAATTCCTGCGAGGATAATGTGGATGATTTGGCCACATTAGAACTGCTCGACGAAAATACAGTCACCGAGCAGCTGCAGAAGCGCTACTCCAATGGCCAGATCTATACCTACGTGGGAGATATTCTTATCGCAGTCAATCCTTTTCAGAAGATGGATCTGTACACCCCACAGTgctcaaaaatatacattgggGCCAAACGCACTGCGAACCCGCCACACATCTTTGCTGTTGCTGATATAGCCTACCAGTCCATGGTGTCTTACAATGCGGATCAGTGCATCGTCATCAGCGGTGAGAGTGGTTCTGGGAAGACAGAGAGTGCCCATCTTCTGGTGCAGCAGTTGACAGTCCTTGGAAAGgCCAACAACAGAACACTTCAGGAAAAGATTCTGCTTGTTAATAGCCTAGTGGAAGCATTTGGAAATGCTTGCACAGTCATAAATGACAACTCCAGCAGGTTTGGGAAATACTTGGAAATGAAGTTCACTTGTGGTGGAACAGTGATTGGAGCCCAGATCTCAGAATATCTTCTGGAAAAATCCAGAGTCATCCACCAAGCTTTaggagagaggaacTTCCATATTTTCTATTATGTCTACGCTGGTCTGGCTGAAAGGAAGAAACTCGCACATTACAAGCTGTCTGACAACAAAACCCCAAAGTATCTTGAAAGTGAGCACGTTAAATTATTACCTGACATTGTGAACAACGCCTTTTACAAAGAGCAATTTGACTCCGTGGAACAATGCTTCAAAGTCATAGGATTTAACCTTGAGGAGCTGGGAAGTGTTTACAGCATTTTGGCTGCCATTTTAAATGCTGGTGACATTGAGTTTGCATCAGTTTCCTCTGAGCACCAGACTGACAAGAGCAATATTTCAAACACTACAGTGCTTGAGAGTGCCGCGTCTCTTCTCTATATCCGGGCGGATGAGCTGCAGGAAGCTCTCACGTCGCACTGTGTTGTCACTCGAGGAGAAACCATCGTCCGCCCCAACACTGTGGAGAAGGCCATCGAGGTGCGAGACGCCATGGGCAAGGCTCTGTTCGGCCGCCTCTTCAGCTGGATAGTGAACCGCATCAACACATTACTCAAACCTGACACCCAGCTGAGaattcataaaaaaagaagCCAAAACGAATACCTGAATGAAGACGTGGATGCTCGAGTGATTGAGTATGAGGACAACCGGCCTCTTTTGGATATGTTTCTGCAGAAGCCAATGGGCCTGCTCTCATTGCTGGATGAGGAGAGCCGATTTCCTCAAGCTACAGACCAAACCCTTTTTGAAGATAATCTAAAATCAAAGAACTTCTGGAGGCCAAAGAGGGTTGACCTAAGCTTTGGGATTCATCATTATGCTGGGAAGGTAATTTCTTTCACATACTCGATGCATTTTCAGAACAACAGTGCAGTGGATCTAGTTCTCTACAACGCCAGTGGCTTTCTAGCAAAGAACAGAGATACTCTTCCTGCAGATATTGTCCTTTTGCTGAGGTCCTCTGAAAATGATCTGATACGCAAGCTTGTCACCAATCCTCTCACGAAGACAGGTAACCTGGCCCATACTAAGGGTAAAGCGGCAGGAAGCAATCGTAGTACTCAGCGCTCCTCAAATACTGCCAAGtgctGTTTCAaaattttgtttgaaaatATGGAAATGCTTGTGTTGTTCAGTTCATTATCAGTCTGTGAGGGTGACAGCGGGGAGTCTGCACATCATCCCAGAGAGACAACCAACATGAGAACACAAACTGTTGCATCATATTTCAGATACTCTCTCATGGACCTGTTGTCCAAGATGGTGGCCGGTCAGCCGCATTTTGTCCGCTGCATCAAGCCCAACAACGATCGCCAGGCCAGCAAGTTTGACCGGGAGAAAGTGCTCGTCCAGCTGCGCTACACTGGTGTCTTAGAAACCGCAAAGATCCGGAGGCAGGGCTATTCTCACCGGGTTCTCTTCGCCAACTTCATCAAGAGGTATTTTATTCTGGCATTTAGTTCAAACGAAGACCCTCCTGTGAGCCCAGAAACCTGCGCTGCAATATTGGAGAAGGCTAAACTTGAGAACTGGGTCCttgggaaaacaaaaGTGTTCCTGAAGTACTACCACGTGGAGCACCTGAATCTGATGATGAAGGAGACTGTGGACCGAATAATCCTGGTTCAGGCTTGTGTGCGAGGCTGGCTTGGAGCCAAGCGATACCGCAGACTGCGAGAAAAGAGGGAACAGAGCGCAGTGGTCCTCCAGTCCGCTTACAGAGGATATAAAGTTCGAAAAGAGCATGTAGGTGAAAGAAATACAGCCAAGAATGTGACTTTTATCACCCAACTACAAGCTGTTTGTAGAGGATACCTCGCAAGGAAGAAGTACAAGGAGATAgtggatgaaaaaaacaaggctGCTGTAAAGATCCAAGCTCGCTATAGAGGACATAAGGAGAGAAGGagcttcaaaagaaaaaaGGAAGCAATGATGAAAGACAAGCAATCAGCAGACACCAATTCAGTTCAGGAGCAGTCGGGTGAGGAGGCAGCGCCACAGGAGACGCCCAGTGAGAATGGggaccagcagcagcagggtgaTGAAACGAAGCAAGAGCACGCAGCTGTCGTTCTCCAAAGCAACTACAGAggttacagagagagaaagcggTTAAAGGAAGAGCAAGAATTTAAACCTGATGACTTTGCAGATTTACCTCCCCCAGTTGATGAAGATGACATCCAATTGGAGTTGGTGAGCTCTGAAGAGGAATCCCCTGCAAACACCGACGAGCAGGCCAAGGCTGCCACCGTCATTCAGAGCAACTTCCGAGGACACAGAGAAAGGAAGAAGCTTGAGGAAGAGGGGAAGATCCCTCCGAGGGGAAAGAAGGCCAAGGCCACTGAGGAAGAAACGCAGCCGGATAAAGAGTCTGTAAAATCAGAGGAGGAGAAGACCGAGGTGACACCAGGGAATGAAAAGGATGAAGCCAAAGCAGCGGTGGTCATCCAGAGCAACTTCCGCGGTCACAAGGAGCGGAAAAGACTGCAGCAGGAAGGAAAAATACCCAACAGAAAGGATGTCAAAAGGGAATCGCAGGAGATACCTGCGGCGGTGGTGGAAGAGCCAGAGCCGCCCAGTGATGGGGGAGGAATTAAGGAGGAGAGAGCAGCGACTGTCATCCAGAGCAACTACCGGGGTCACCGGGAGAGGAAGAAGCTGAAGGAAGACCGGGAACAGGGAAAAGTCCCAGGTCAAACTAACGTACCCCCGGCGCCTTCACTTGCACTTTCCAGCCCTGAAGACACCAACCGGAATGAGCTGAGCGAGGAGGAACAGGCGGCCGTGACCATCCAGAGCAACTTCCGCGGCTACAAGGAACGCAAGTACCTCAGAGAGAACTCCAGTAAAGACACGGATGAGCTGGAGATATTTTCTAAACAAATAAGCAAGTTTTCCGAAGACTACTTAACTCTTCAGCAAAAGTTGAATGAAATTATTTTGGCACGTCAGTTAAACCCATTAAACTATGGTATGTTCGTCAAAGGAAAGCAACTCAATGGGTACCCTGCAAATTATCCCCCACCAGTAGTAGATCAGAAGCAGACAAGGATGCCCAGACGGACCCAGCAGCCAAAAACTCTGAACACAGCTGAAGACTCAACCTACTACAACCTGATCCATAGATCAGTCCAGGATGATAAACGGAAGCCAAGGAAACAAAGTCCAGGGAAACTATTGGACGATGAAGACTCTTACTACCAAGACCTTTCCTCCAGTAACTCTGTGAACACAAATTCCAGTCCAATTGCCTCACCTGACCAAACGTCTTCTAGCAAAGGGCCATCTTCAGAGCCAAAGGCCCCAGAAACCAACAGCACTGGAAGACACCCCCTTCCCAAAATGCCATCAACAGAGAGCCAGGAGGAAAGTAATCCCTATGATTACAGAAAACTACTTCGAAAGACATCCCAGAGACAGAGACTCATCAAGCAATACTAG

Function

GO:

id name namespace
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K08834 MYO3, DFNB30; myosin III

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019233 True 4686 mRNA 0.47 34 9981736 10034056

Neighbor

gene id symbol gene type direction distance location
AMCG00019232 gad2,LOC107687529 coding downstream 4040 9959470 ~ 9977696 (-)
AMCG00019228 NA coding downstream 57381 9904163 ~ 9924355 (-)
AMCG00019229 pdss1,LOC107675251,LOC107687541 coding downstream 88512 9886268 ~ 9893224 (-)
AMCG00019223 NA coding downstream 144865 9824740 ~ 9836871 (-)
AMCG00019225 NA coding downstream 169123 9801052 ~ 9812613 (-)
AMCG00019231 myo3a coding upstream 14593 10048649 ~ 10052298 (-)
AMCG00019230 NA coding upstream 68495 10102551 ~ 10105694 (-)
AMCG00019239 NA coding upstream 110249 10144305 ~ 10158368 (-)
AMCG00019240 NA coding upstream 203214 10237270 ~ 10238088 (-)
AMCG00019241 NA coding upstream 204371 10238427 ~ 10318815 (-)
G32351 NA non-coding downstream 629084 9349849 ~ 9352652 (-)
G32144 NA non-coding downstream 1606332 8338036 ~ 8375404 (-)
G32096 NA non-coding downstream 2009511 7971193 ~ 7972225 (-)
G32076 cul2 non-coding downstream 2223509 7755253 ~ 7758227 (-)
G32061 NA non-coding downstream 2278660 7702842 ~ 7703076 (-)
G32586 NA non-coding upstream 934073 10968129 ~ 10968403 (-)
G32587 NA non-coding upstream 934461 10968517 ~ 10968773 (-)
G32635 NA non-coding upstream 1084652 11118708 ~ 11119507 (-)
G32693 NA non-coding upstream 1562760 11596816 ~ 11600671 (-)
G32706 NA non-coding upstream 1599453 11633509 ~ 11636317 (-)
AMCG00019213 NA other downstream 547622 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 1079858 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 3297435 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 4995352 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 5041069 4932349 ~ 4940667 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 1818052 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 2379098 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 3134380 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 3628060 13662116 ~ 13665230 (-)
G33163 NA other upstream 4457835 14491891 ~ 14558290 (-)

Expression


Co-expression Network