AMCG00019234


Basic Information

Item Value
gene id AMCG00019234
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 9939826 ~ 9947046 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019234
ATGCCTGTCCCCACAGCCGCGCTGCTCTTCGCGCTTGGCGCAGTGGCCGCGCTTGCAGGCGCAGACCGGGGAGGCGCAGAGCTGTGCCGGGGGGCGCCCTGTTACCGGGCGGCGCAGGGCACCCCGGACCACCAGCACCCTGTCCGTGCCAGCCTCCCCAGCAGGACCGCCGCTCACACCCACCGCTCTCTCCACGCACAGACAGCGGGCAGCGCCAGGGGAGCCGCGGACAGGCGGGTGTCGGAGGCGGGCAGCTCGGGATGCACGGGGGCGCACTGTGGAGCTGAGCACGCCAGACACAACGACACCAGCGACTGTAAAGGCATCGAGTGCAAACTACCCCTGAGGATACGACTGAGGCCAAGACCTCGCCCGTGTGTGGGGGAAACCTGCCCCTCTGGCCCCGAGGATGCCCACGGCCAGCCCACCCTGGTCCACATGCCGGACAGGGCTGCCCAGTTTCTGCAGGAGTTCCCCGACTTTGGGTATCCGGCGTCGGAAGTGGGAGGATCTCCTCTGGGGGTGCAGCTGACGTGTGACATTAAACCAGGGGAGAATGAGGTTCCCTCTGAAGATGCCCTCATTCTTCAGTTGCAGCTTGCCAAAGGGCAGGAGACATTTATTGAAGCACTAAAAAGCCAGCAAACAGTCATCACAGACTTACAGCAGAGACTCACTTCACAGCAAAGCACACTGATTAACCAGCAAAGGGAAATCCTGGAGCAGCAGAGGAAAATGTATGAGCAGATGGACCTAGTGAAGGTTCAGTACAGCATGCTATTTGAGACCGTCAAGCAAATGTCTTTCCAGAGCCTGCAGGGAGATATCCAGAGCTATTTTGAAAGCCACCTTCAGGGACTGCAGAATCAGGTGCGCAGCCACCTTCAGAAGTCCTACGCGGTGCACAAAGTTGACGTTGACGCCAAGGTGATTGACGTGGGAGGCCCGCTGCTCGAGTGCAGTGCCTGCGCAACGGAGGAGTACTGCGACTTCCAGAGCGACCCGCCCCAGTGCGAGAAGTGCACCATGTGTCCGCCTGGCTTTTTCCTGGTGTCCGAATGCTCCTTGAATGCAGATCGGATATGCCAGGATAGGGATGAATGCATCGAATTACCCAGCCTATGTGGAGAGCGAGTTAAATGTCTTAACACTCCAGGCGGTTTCAGGTGTCTTGGAGTTTCTGAAAGAGACGCTTCTGCTGGCGTGTGTGGACATGGCTACTTCTTCAACAGAGAGCTCCAGGAATGCCAGGCCTGTGACGACTGTTTAGGGCAAGCGGTGGCCTTTCCTTGCTCAACCGCAAGTGACACCATTTGTGCTGTCAGTTCGGAGACCAAGCTTTCCCAGTCCTGGTCTGCTTTGGTCACAGTGCCTCCAGCCAATTCCCAAGCCGATAACATCTATTCAGGGCTGTACCTCAACATTCAGGCAAAAGAAGAGACCGACTTGACTTCCAATGAAGATGGCAAGCTGATATTTCAGCAGCACGGACTAATATGGGCGGATCACAACTTTGCGTTGAAACACAGCTGCAGGAACTTTCTTCAGCTCTCCATGAAGCTGAATAACAGCGAGGAAGGGTGGGAACTGAGCGGCATCCGTATTGAACAGCCTGACGGCAAGTACTTTCAAAGCGTCAGTGTAAGTAGCACAGCTGAAGTGGAGCCCAACTATATGCTGTCCCTTTTCCTGAAAAGCCCCAATCAGTTCTGTAATCAGAGCAAGGACCTTCACGTGTACGATCTCAACACCCCCTTCAGCCTGTTTTGGCTGTCTCACGACACAGGTGCAGTTGCAATGACAGCACAGATGTCAATGTCAGTGCAGTATCAGACCAACTACAGGCCTGCTTTCAAGGTGATTTCCGTTTCAGACCCCTATATGATCAGCCTGTCCCACGACAGTAGAGGAGTGCGCTTCACAGAGAGTGGGGTTGTGAAGTTTGTTTTCCAGCAGGCACTGTATTCCATGGGCCACAACTGTGTCCGGGAAGGATATTCATTAATTTCCTACATTAACAGGAATGGGACAAACACAGAATTAATGCACGTATTCAAGTCTGGAGTAAATTACAGAGACACGTCAATCTCTTTGTCCGGCGCAGCTAAGGTTGGTGCAGGAAACATACTCAGCTTTGAGATCCTTTCTCCTTCTCAGTGTAACATCAGATATTTTGGAGACAACTCTGGCATCAGCACATTAAGCCTCATCTGGATCCCATCTGCAGTCTCCATGGCTCTTTCTGCCACGGTCTCCAGAGCTGGATTGCCCACGGGCGCTGTAAGAAACAAAGTCCTGTGCTTTCAGCAAGTGACACCAAACGAGGAACAGATCCAGCTCCTCAGCTCGGGACAGTTTGCCCGGAGGTACTTCATATTTCGGGAGACTGGGGTAGCAAGCCTGGCTTTCAATCTGAAGCTGATCCACTCTTGCAACGTTGTGAAGCTCATGCTTCATCGCCAGCTGGGAGATCAAATGCAGGCGACAGCTATTGCACAGCAGATTGGAGGGCATATGCTGGAGGGGAGCGAGTGGACAAGTTTGGGCCTCCGCACATCCTTTGATGTGCACAACGGGACGATGGTTTACATCACACTGGACTGTGTGCGGGGGCGGATCAACCAGATCACTCATGAACGAGGCACATATCTGTCCATTCTGTGGGTAGCATCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019234 True 2676 mRNA 0.54 4 9939826 9947046

Neighbor

gene id symbol gene type direction distance location
AMCG00019236 NA coding upstream 34093 9893861 ~ 9905733 (+)
AMCG00019237 abi1a coding upstream 55256 9873585 ~ 9884570 (+)
AMCG00019221 LOC107687524 coding upstream 115410 9813390 ~ 9824416 (+)
AMCG00019222 NA coding upstream 147232 9788361 ~ 9792594 (+)
AMCG00019227 NA coding upstream 194189 9732190 ~ 9745637 (+)
AMCG00019235 NA coding downstream 323573 10270619 ~ 10279108 (+)
AMCG00019238 NA coding downstream 335943 10282989 ~ 10304824 (+)
AMCG00019242 arhgap21 coding downstream 384069 10331115 ~ 10403491 (+)
AMCG00019245 NA coding downstream 701533 10648579 ~ 10658798 (+)
AMCG00019248 NA coding downstream 754230 10701276 ~ 10709432 (+)
G32437 apbb1ip non-coding upstream 19790 9917320 ~ 9920036 (+)
G32418 NA non-coding upstream 127189 9809884 ~ 9812637 (+)
G32321 LOC103376870 non-coding upstream 189556 9693269 ~ 9750270 (+)
G32325 NA non-coding upstream 213073 9719039 ~ 9726753 (+)
G32324 NA non-coding upstream 221262 9718022 ~ 9718564 (+)
G32490 NA non-coding downstream 161860 10108906 ~ 10109150 (+)
G32549 LOC103376870 non-coding downstream 516117 10463163 ~ 10508063 (+)
G32671 NA non-coding downstream 1430910 11377956 ~ 11448251 (+)
G32674 NA non-coding downstream 1685312 11632358 ~ 11637880 (+)
G32778 NA non-coding downstream 2053917 12000963 ~ 12001164 (+)
G32293 armc4 other upstream 311164 9369898 ~ 9628662 (+)
G32286 NA other upstream 400615 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 591007 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 1555234 8345455 ~ 8384592 (+)
G32005 NA other upstream 2518743 7420501 ~ 7421083 (+)
G32539 NA other downstream 457593 10404639 ~ 10409497 (+)
G33159 LOC103376870 other downstream 4492207 14439253 ~ 14486706 (+)
G33283 NA other downstream 5217302 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 5607773 15554819 ~ 15626955 (+)
G33406 NA other downstream 6096896 16043942 ~ 16081943 (+)

Expression


Co-expression Network