AMCG00019235


Basic Information

Item Value
gene id AMCG00019235
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 10270619 ~ 10279108 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019235
CAGCCATTGAAACAGCAGATGCGCTCGGACAGCAATAACGTCACACTTGAACCTCATTaactaattgtttgtttttttgtttgtaactaAACATGTCCGCTATGTATCCTGCCGAAAGCATTTATAACCTTATTCCCAAAGAAGAGGTTACAGTCCAGAAACCACCGAGATATACATCAAAGTTTAGGGAACAAGTTAAACAGGATACAAAAAAGAACAAGGCTGCAAACAGAACCATGGGGCCAGCAAAAGTAGAGGTACCTTCACCCGAAAAGTTTCTGCTGAAACATTCAAAGGAACCCCAGCTTCCTGAAAAGAAACCATTCACTCGTAAAGATGATGGAAGGAGAAAACCTCAAGTGCCTACAAAGACTGATTACCCAGTTATGGGCATTCAGACGAATACGAACTTTATAAACTCCAATGCAATTGAAAACATTATGGCAGTGCCGAAGAAGCCACAGCATGTCTACGTTGATACCAGAACAGGAAATAAGCAGCCTTTGGAAACTTCAGGACTTGTTCCAAAATATGTCAAGAAAAAGGACTATGGTCAAACCCCGGAATACCTGCTGCAGCGCAACGAGGAGGTGAAGAGAGCTCAGCAGGAGTACGACGACTATGTGAAGGAACGACTCCGACAGGGAGCGATGCAACAGCTCTCTGAGGAGCAGAGGCAAACACTTCTTGAAGGTCTGAAGAAGAACTGGGGAGAGCTCCATCACCAGTACCAGGGCCTGTCTGTGGTCACTGACACAACACCTAAGAAAAACCGCAAGGAGAGGCTGGAGTCAGAGATGAAACAGCTGGAGAGGGACATCGACCACATTGAGAGACACAAAATCATTTATATCGCAAATAACTAAAACAGAAGGACTTATTGCACATAACAAGTGTCcttcattgaaaaaaataaagtagcggtttcaaattgcaaatattattgACTAGTTCCAAGCAGCACCAtcttctgttttatgtttttaattcatccCATTTATTGTGTATGCATTCCTACAAGGCAAGATCATTTCGGTGggcaatgaaaatgaaattcaaaatgtctgtggacatttaatacacattattgctctttgGCCTCTTTCAAATAATCAGTTGTGCATGGATTAGTGTTGAACAGTTTGGCCCTTTATGTATCTAAGCAATTTAAATGATCcaatgaataaaaacatcacataaaaagagattaaaataaatattaccatgatgttttattaaacatacaaaacaaaaataattgaaaactatAGCTCCGTTAATAATGAGCAGAGCAaacagtatgtgtgtttgtaacaTAAATAATCCTCTTATGTTCATGAGTTTGGTGTTCATGAATCTGAAATAAGGTTGTGCAATTGTAGCCGTAAGTAGTGATGTATAAAGTGTTAATCCTAACCTCTCACTCTTTTAAAATAGTTCTAGtggtacaataaaataacacataataCGATTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019235 True 1476 mRNA 0.39 5 10270619 10279108

Neighbor

gene id symbol gene type direction distance location
AMCG00019234 NA coding upstream 323573 9939826 ~ 9947046 (+)
AMCG00019236 NA coding upstream 364886 9893861 ~ 9905733 (+)
AMCG00019237 abi1a coding upstream 386049 9873585 ~ 9884570 (+)
AMCG00019221 LOC107687524 coding upstream 446203 9813390 ~ 9824416 (+)
AMCG00019222 NA coding upstream 478025 9788361 ~ 9792594 (+)
AMCG00019238 NA coding downstream 3881 10282989 ~ 10304824 (+)
AMCG00019242 arhgap21 coding downstream 52007 10331115 ~ 10403491 (+)
AMCG00019245 NA coding downstream 369471 10648579 ~ 10658798 (+)
AMCG00019248 NA coding downstream 422168 10701276 ~ 10709432 (+)
AMCG00019254 NA coding downstream 798863 11077971 ~ 11087695 (+)
G32490 NA non-coding upstream 161469 10108906 ~ 10109150 (+)
G32437 apbb1ip non-coding upstream 350583 9917320 ~ 9920036 (+)
G32418 NA non-coding upstream 457982 9809884 ~ 9812637 (+)
G32321 LOC103376870 non-coding upstream 520349 9693269 ~ 9750270 (+)
G32549 LOC103376870 non-coding downstream 184055 10463163 ~ 10508063 (+)
G32671 NA non-coding downstream 1098848 11377956 ~ 11448251 (+)
G32674 NA non-coding downstream 1353250 11632358 ~ 11637880 (+)
G32778 NA non-coding downstream 1721855 12000963 ~ 12001164 (+)
G32892 NA non-coding downstream 2330293 12609401 ~ 12612533 (+)
G32293 armc4 other upstream 641957 9369898 ~ 9628662 (+)
G32286 NA other upstream 731408 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 921800 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 1886027 8345455 ~ 8384592 (+)
G32005 NA other upstream 2849536 7420501 ~ 7421083 (+)
G32539 NA other downstream 125531 10404639 ~ 10409497 (+)
G33159 LOC103376870 other downstream 4160145 14439253 ~ 14486706 (+)
G33283 NA other downstream 4885240 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 5275711 15554819 ~ 15626955 (+)
G33406 NA other downstream 5764834 16043942 ~ 16081943 (+)

Expression


Co-expression Network