AMCG00019243


Basic Information

Item Value
gene id AMCG00019243
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 10404645 ~ 10432440 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019243
GATGCACAGGGAAATACTGTACGCTACCAGGGAGGGACAACACACTATGCGTCAAGCTATGGGCCCTCCACCTCCGCATGCCATTCAGAGCCCGATTCCTCCTCCCAACGCTCACTCGATGCCACCGTCGCCCTCCAGGATCCCCTACGGGCCTCGTGCTATGGTCATGGCAGGAAGTGCCACGATCCCTCGGGACCGCCTGCCTAGCGTCCCTCCCTCCAGATCGATCTCCCCCTGCCCAAGTGCCATCCTAGAGAGGAGAGACGTCAAACCCGATGAAGACCTGGGCAATAAGAACGTGGCTCTTTTGCGGAGCGAAGGCCTCTATGCAGACCCCTACATGCTTCACGAGGCCCGTCTGAGCATTGCGTCTTCCCACAGCGGCCACCCGGGGGACATGGTGGACCACAGCATGGGCTATGCTCGCGGCTCCAGAGCAGCCGGCTCGTATGCCACCGCTACTATGACAACAGAGATGATGGAGCATCAGACCCTGTACAGACAGAAGTCCAGGAAATATGGCGACAGCCATTTGCCAACTTTGGGTTCAAAAACGCCACCGCCTTCCCCCCACAGAATGGGGGGGGACGTGAGGTTGATAGATATCCACACTGGGCAGGCACCACACGTGCCTCCTCAGACTGTTCAGCTTGAGAGGTCTTCTCCCGTCCGTCTCTCCTTTAAGAAGGACGCTGGCAATTCAGTGGCTTTGGAAACCGTAACCAAGACACGGAGCAACATGGCCTCACCTGTCATTCCTGACGTCCCATTAGGACACGGGGATAAGTCAGTCCCGGGacatggcctgcctgcatcacCGAATGACCCTCAGACCAGAGAGCGAATGAAGGCCATGGAGCAGCAACTTGCCAGTTTGACAGGACTTGTTCAGAGTGCACTTTTAAAGGGGCCAAATGCAAGCGGTGCCAAGGAGGCTTCCAGtgAGAAAAATGTGAAGACTGCCTCTCCTCCAGTCCACAGCACTCATGGTGGAGTTGTTTCTAGTACTCCAGCAGTGAAGAGCACAGTGGTGACTGTCGAGACCTCGGCAGTGAACACGCTCCCCCCCCCCAGCAGCCCCACGCCAGTTCAAGTGAATCTGATCAATTTCAGAAGGAATGTCTCTGACCTCCGGCTGCAGCTCCACCAAATGAGACAGCTGCAGCTGCAGAACCAGGAGGCGCTGAGGCTGATGCTGAAGAGGGCGGAGCAGGAGATCAGTGGTAAGGTGGCGGAGACGGTGCGGAGACTGGAGGACCCGGTGCAGAGGCAGAGAGTGATGGTGGAAGAGGAGCGGCAGAAATACCTGGCAATGGAGGAGAAGATCCTCATGAAGCTCTGTGACCTGGAGAGGTATGTGGATTCGCTGAAGAAAGACTCGAGCTCAATTACCGTTCACAGAGCCGTCACTCTAAAGGATGTAGAAGAAGGGGCAGTTAGCCTGCGAAAAGTGGGGGAATCTTTGGCAGGACTCAAAGGAGAGTTCCCCACACTGCAGAATAAGATGCGGGCTGTATTGCGTGTGGAAGTGGAGGCTGTCAAGTTCCTGAAAGAGGAGCCGCACAAGCTGGACAGCATGCTGAAACGAGTGAAGACACTCACTGAAATCCTGAGCGGGTTGAGAAGGAGTACCTCAGAGAATCTTCTAAAGGGCTCCGATCCTGCACAGGGAAAAACCACTACCACAGAGACCATTGTGGCTTTCACTGAATCTGAGTCTCCCAGTGCTGTTGCCATCTCAGCGCAGGAGCAGCCGAACTCCCCCACAGCTCTGCCCGAGCCCCAGAGCTCCTCCATCAAGTCAGAAGTGATGCCAACCTCCCCGGTGGTAATTCACCATGTCCAGAGCTCCCCAGTGCACATCCACCAGTCTCAGCACTCTGCCGTACTGGTCCACCACTCCAACAGCCCCCCAGTCACACCAACCCAGGGCCCAGATGCCCCCGTGTTGGTGCAGAGTAATGCAGAGAGCATGGAGCAGAGCCAGGAGACGAGCTCAGTCCTCCAGGTGCAGAAACCCTTGCAGAATCAGGAACACGCGGCCCCGGCATCAACAGCAGTGACCAACAATGGCGGCACCACACAGAGCCTCTTCATTGAGGAGATCCACACGAGCAGAAGCAAAACCAGAAACAGAGTTCTGTCCATCGAGGCTGCGGAGAAGGAGTGGGAGGAGAAGAGGCAGAATATAGGGCACTACGATGGAAACGAATTtgagaagctgctgcaggaggcTCAGGCCAACATGATGAAAGGTATCCCAAACCTGGAAGTGGTCGAGGCAGAAGCACCTCCGGTCCCGCCGCCTCCCCACCAGGATGAGGTGGACACCCCCCACACCCTGGAGCAGCTGGCAGGAGACGAGACTCCGCACACAGAGCCCAGCATTGAGAAGGCAACCAAGTCGccgcccccgccccctccccgcAGGAGCTACCCCCCAGGCTCGGGACTCACCACAGGAAGGTCAGGGGAGGTGATCTTCACCAGCAGAAAGGAGACTGTCATTGCTCAGGCCGAGGGCGAGGAGGAAGGCACGCCAGCACCACACGCCAAACCAACCAGGAGCCCTTCGGAAAGCAAAGTGTCTCAGACCCCACCACCCATCGCTGCCTCCGCCATCCAAGAGGAAGAGGACGATGGGGACAGGATCATGGCAGAGCTGCAGGTTTTCCAGAAGTGCACTTTTACGGATGTAGTGGCAAAAAGTTATGTTGAGCATACAAGAGTTGAACCCCAGGTCAGGGAGCTAAGGCCTGGGGCTTTAATGTCACCCAGAGACAAGAAGAATATGGAGATGCTCGGCGAAGAGAGACAATCCGACAAAATGGATGAAAATGGAAATGACACCGTGCTACAGAGTCCAGGGGTCATATATTACGTCACTGCACAGATTTCCAAAGAGCACGCCTCGGCAGACATGGAAGACCAACGGGAGCGCAGGGAAACCCACACTGAAACAACCGTTTCCTCTTCACAGGTTGCCAATGTGAATGCTTATGAAATTTCAGAAAGTCTTCAGCAGTTTGTGACAAATGAGTTGCCTGTTCTCTCAGTTTTGGAAAGCCAAGAGAATGACCCCCACACTTCCCCTCAGATGCAGATAGTGTACACTGAATATCATCAGGAAGATCCTGAAGTGACCACAGAAGCTGTAGATATTCAGCCGATGGGTATCCCAGTTCAGAAGGAGCAGGTAGCTGTAACGATGTCTCATCAACTCAGTGCTGATGAACAGGCAGTGACCTTATGCTTCCAGGAAGGTGTGCCTCATAATGGAGCAATGGTGGTGGCAGGAGGGCTATTGGTTACTTCTACAGTGATTATTCAAGATGCTTCTCCCACTGTCGAATCATCTCACGAAGGCGCAGAGAGCGGATACAGTCAGCAGATTGTGATGAGATCTTCTCAAGGTCGAGTCGTTGAAGAGGCAGACACCAACTGtagctctctgtgtgaagaaggtCCTTCGCCCACTGATAACATCGCCTTCATGATCACTGACACAAAAGTGCAAGCTCTGTCTTGTGGAGAATATGAGGAAATAGTCAACAGCAAAGGAGAAAATGTTCAGACCGTCAAAGTCGAAGATAACCGGGAAATGACCACCCAAGATAACAACTTTGATAAGAAGCCAGTGATCATCATATTCGACGAGCCCATGGACATCCGCTCTGCCTACAAGAGACTGTCCACTATATTTGAGTGTGAGGAAGAGCTGGAGAGAATGCTGGCCGAGGAGCGGATCGAGGAGGAGAATGAAGAAGCTGAGGAGGCAGATATAGAGAGGAAAGATCTCTCTGTGGAAGCTGGAGTAAATGAAGCAGATAACACAGGGTACGTATCCAATGCCCAGAGTTTCGCTTACTCTTCTGGCGCTGTGACACAGGAGGACAGCAGGCTGGAGGAACCATCCCCGGGACTGATGGCAGAACAGACAGAGTCTGTGAATGACGGCAAGCAAGACGGCAAgaaaaaattcaaattcaagttcCCTAAGAAACAACTGGCAGCGCTCACTCAGGCCATCCGCACCGGCACGAAGACGGGCAAGAAAACGCTGCAGGTAGTGGTGTACGAGGAGGAAGAAGAGCCCGATGGGACTGTTAAGCAGCAGAAGGAAGCTAAGAGGTTTGAAATCAACCGGTCAAAGTCCAAAGCTGACTCGGTCACCACCATTAcaaccagcagcagcagcagcagcagcagcacaaagACCGTGACATCAGGTCAGCAGAGTTCATCTGACTCCCAGTACAGGACTGATGAGATTCGCAAGAACACATACAAGACCCTAGACAGCCTAGAACAAACCATCAAGCAGCTAGAAACAACGATAAGTGAAATGGGCCCCCGATCCCCTGACGACGCGGCTCACGAGGAATCGAAAGCCTACTCTCTTCAGGGGGCTGGATCTGTAGACAAACGCAGTGCGCATGAGCTCGACTCCATGTCAGAGCCAGCCGCCCCCGTCTATCATTCCCATAAACCTGCTCACCGCAAGAAGCCAAAACCACAGCTTCTGCCCAGGCCTGCCGCCGTGCCCTCCAGCCCCAGCGAACAGGTCTCTTTTTAGCTCTTCTCGCTTCGCGCAGGTGGCTTGGTTTcttttggttctttttttttttatttattattatttgtgtgttttttcccccctaacAGCTGATTCTACAGAGTATTAATACATTCGCAGGTGCTGGGAGACTTCTGCTTTAACCTTCTGTGTGATTACGGTTGACATAATCGTGAACTGGCATTTAAAGGGGTGtctacattttgattttgctgCTAAAACTCTAACCCTGGGTTCAGGCAGTGAAGGACTTGATGCATTAAATTGTGGTTCTTTGATTCTCCTTCATTCTGCGCATGTTGGTTTTCTCGTGGGGGTGTCGGTGCATGCAGTCTGTCGTTTTGTGATTTCTAATTGTTGACAATCATGAATGTGAACCGATTCTTTGAAGTGATTTGGCTCTCTTTGTTTTGCCTAATCTTACACGCTGCCTCCAATGTGGTTTTccgcttttgtttttgtttcgtttttatCCGAATCCTTGCAGAGCACCAGTGTTACTACATCAACCAGTCGGATGCCAGTGCCTTTGTCTGCGAAAACCAGACAGCAACCAGGAGGTACAGACAAGGcaggaaaaccacaaaaactGCAGGACCCTCAGAGGCAGTTCCGACAGGCTAACGGAAGTGCTAAGAAAGCTGGTGGGGATAATAAAGCTACTTCCCCTACTTTACCTGCTTCTAAGATCCCAGCCTTTTCTCCTAGTTCTGGGAAAAGCAGCACTCTGTCTGCTTCTAGCTCAGACGCTACTAACCCTATTAATTCCTCTTCTTCCAAGTCTTCCATCCCTTCTCCCAGcctcctgcccccccacaccGGCCGCCCCGCTCCCCACCACCCCGCCACGTCCTCCCACATCCCCTCCCTGTCTAACGGCTCTCTCAGACTCCCAAGCCCCACTCACACCGGTAAAGGTCAAAATCTTTCGTTCTCACCGCAGACTCAAAATGGCCGAccacccccttcctcctcctattccccctcctcctcttctccaaTATCCCCCGTCTCCCTGAGTCACGGTGCGAAGAGCATCCGGACAATACACACACCCAGCTTCATCAGCTACAAGCCACAGAACGGGAACAGCAGCAAAGCCACACAGCCACCTGCTTCATCTGCCAAGGATACGGCATAATCTTTTGTGATGCAAGGGAAGAAAAACTTAAACACACTAGCAGGTTGATGGGGCACCTGTGCTTTGcggatttgttgtttttaatgtatagcACTATTATTTTAACTGGCTGCCATTTCATTCATACACCAATacgctttttattttgttttaatccgaTGTTTTAAGACAGATTTGCAGATCTCAGTAAATTCATAGAAATATGGAAGAAACGGCACCAGAGAAACCGCTGCCATTTGGTTTTACTTACGGTGTTAAAGTGAATGGGTTGTGAATAAGCAAGGTTTTTAGGGGACGGGTGTGTTTTCTGCACAGTGGTGTTGAAAGTATATTTTTACTAATGGTTTGAAAGGGGGTGAAAGGATACAGGGCCTGGCATGTATCTAGAGTGAAAAGATCTAATTttacaaaaagaataaaagctGGTTGACGCaagtatattttgaatttagtTTTAAGTCGCCAGCACTTACTTACTCGTTGTTAGCTTTATAGTTCAActaataaaacatgacaaattactattttaattaagaatggGATATTTTGTTTGATCTTATTAGCTTCCCATGCACTgccaatttatttaaaatagtgtaTGTAATACCTGGTTTGATGATATTGAACTCTTCTGGTTTTAGTAGTTATTATGCCTATTTGCCAAAGTTATTTGTACTTCATTACCAGACAATGCATATATATTGATAAAAACACTGTGTTGGGATTTTAAGTTTAAAGCTGGGGGTAATACCCAAACCTTTACCTTAACACTATCAAGCTTTACTGAGATCTGTGCTTCTCAAGTTAATggttattgatgtttaaatgtatactgATAGTGATTTAAATACTAGCAATCCTGTGTATATacatgcttctctctctcttgggaAACCTTGCATAGTTTTGTTAACATACCAAAGTTTATTTCTATGCATGCCTTTCAGATATTTTAGATGAGTCGTTTGATGCTAATGTAAAAGAGTAATGTTTGCACAGAtagattttgtaaatattttgttttctttcattttgtaaagCTTTAAACCATGATGTATAATACAGTGCTATGGCAAAGACAGAGCTGTGAAggtattaaacaaataaagaaagggCTGCAT

Function

GO:

id name namespace
GO:0045936 negative regulation of phosphate metabolic process biological_process
GO:0042326 negative regulation of phosphorylation biological_process
GO:0010563 negative regulation of phosphorus metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019243 True 6838 mRNA 0.50 15 10404645 10432440

Neighbor

gene id symbol gene type direction distance location
AMCG00019241 NA coding downstream 85830 10238427 ~ 10318815 (-)
AMCG00019240 NA coding downstream 166557 10237270 ~ 10238088 (-)
AMCG00019239 NA coding downstream 246277 10144305 ~ 10158368 (-)
AMCG00019230 NA coding downstream 298951 10102551 ~ 10105694 (-)
AMCG00019231 myo3a coding downstream 352347 10048649 ~ 10052298 (-)
AMCG00019244 NA coding upstream 45926 10478366 ~ 10491810 (-)
AMCG00019247 otud1,LOC102783317,LOC106930095,LOC106960099 coding upstream 212386 10644826 ~ 10645992 (-)
AMCG00019246 ptf1a,LOC107686074,LOC106569290,LOC107664050,LOC107751373,LOC107732570 coding upstream 253790 10686230 ~ 10687265 (-)
AMCG00019249 dlgap1,LOC107751362,LOC107584464,LOC107686064 coding upstream 278020 10710460 ~ 10726158 (-)
AMCG00019250 NA coding upstream 325246 10757686 ~ 10778417 (-)
G32351 NA non-coding downstream 1051993 9349849 ~ 9352652 (-)
G32144 NA non-coding downstream 2029241 8338036 ~ 8375404 (-)
G32096 NA non-coding downstream 2432420 7971193 ~ 7972225 (-)
G32076 cul2 non-coding downstream 2646418 7755253 ~ 7758227 (-)
G32061 NA non-coding downstream 2701569 7702842 ~ 7703076 (-)
G32586 NA non-coding upstream 535689 10968129 ~ 10968403 (-)
G32587 NA non-coding upstream 536077 10968517 ~ 10968773 (-)
G32635 NA non-coding upstream 686268 11118708 ~ 11119507 (-)
G32693 NA non-coding upstream 1164376 11596816 ~ 11600671 (-)
G32706 NA non-coding upstream 1201069 11633509 ~ 11636317 (-)
AMCG00019213 NA other downstream 970531 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 1502767 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 3720344 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 5418261 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 5463978 4932349 ~ 4940667 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 1419668 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 1980714 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 2735996 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 3229676 13662116 ~ 13665230 (-)
G33163 NA other upstream 4059451 14491891 ~ 14558290 (-)

Expression


Co-expression Network