AMCG00019258


Basic Information

Item Value
gene id AMCG00019258
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11177703 ~ 11195791 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019258
CAGTGaatgggaaaaagaaaatgtggtgCTGGGATCAGTATTTAGATGAGGAGAAGGCCATTGCAGCCCCAGTGAAGGTTTTCACAGAGCAACAGTCATATCCCATGTACAGAAATGGCTTTAAAGTAGGGATGCGATTAGAAGGCATTGACCCTCTTCACCCATCTATGTTTTGTGTCCTGTCTGTTGCTGAGGTGATTGGCTATCGTCTTCGGCTGCACTTTGATGGCTATTCAGATTGTTACGATTTCTGGGTAAATGCTGACTCCCCTGAAATTCGGCCATCAGGGTGGTGTGAAATGACAGGCCGCAAACTTCAACCGCCAAAAGGGTATAAGGAAGATGAATTTAACTGGTCAAAGTACCTAGAGGCTTGTAAAGCTCAAGCTGCACCAAATAATCTGTTTAAGAaccaaaataatACTGTGATTCCATCAAGAGTTCAAGTTGGCATGAAGCTGGAAGCTGTTGATAGAAAGAATCCATATTTGGTCTGTGTTGCATCTATAGCAGACATCATAGACCATCGCTTTCTAGTTCACTTTGATAACTGGGATGATACATACGATTACTGGTGTGATGCCAGCAGTCCTCATATTCATCCTGTGGGGTGGTGTCAAGATAATGGACGCCCTCTTACTGCACCTCAGGgaCATCCCAATCCAGAGAAGTTCTTCTGGGAGGAATATTTAGAAGATACCATCTCCACTGCAGTTCCTAACAAGGCATTTAACGTAaGACCACCTCATAAGTTCCAAGTGAATATGAAATTGGAAGCTGTGGATAAGCGTAATCCTATGTTGATGCGGGTTGCTACTATAATCGACACTGAAGACTACAGGATAAAGGTTCATTTTGATGGCTGGCACCACAAATTTGATTTCTGGATAGATTCTGACATGCCGGATATTCACCCCGCTGGGTGGTGTGCCCGCACTGGCCACCCTCTGGAAATGCCCCTCAGTGAACGACAACAAACCAGGGAGTCTGTCCAACACCTGGATGTAGGGGGGTTGGCCACATCAAAGGGGCACGATACACTGGACACCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019258 True 1052 mRNA 0.45 10 11177703 11195791

Neighbor

gene id symbol gene type direction distance location
AMCG00019257 NA coding downstream 51986 11120227 ~ 11125717 (-)
AMCG00019253 NA coding downstream 74856 11101972 ~ 11102847 (-)
AMCG00019252 NA coding downstream 157800 10976788 ~ 11019903 (-)
AMCG00019251 NA coding downstream 206438 10970189 ~ 10971265 (-)
AMCG00019250 NA coding downstream 399286 10757686 ~ 10778417 (-)
AMCG00019256 NA coding upstream 87780 11283571 ~ 11328359 (-)
AMCG00019266 LOC106596660,LOC106569828,LOC100697261 coding upstream 562324 11758115 ~ 11774317 (-)
AMCG00019277 apcdd1,LOC107383547,LOC100712112 coding upstream 740313 11936104 ~ 11954459 (-)
AMCG00019278 NA coding upstream 856869 12052660 ~ 12053218 (-)
AMCG00019279 piezo2 coding upstream 882771 12078562 ~ 12138607 (-)
G32635 NA non-coding downstream 58196 11118708 ~ 11119507 (-)
G32587 NA non-coding downstream 208930 10968517 ~ 10968773 (-)
G32586 NA non-coding downstream 209300 10968129 ~ 10968403 (-)
G32351 NA non-coding downstream 1825051 9349849 ~ 9352652 (-)
G32144 NA non-coding downstream 2802299 8338036 ~ 8375404 (-)
G32693 NA non-coding upstream 401025 11596816 ~ 11600671 (-)
G32706 NA non-coding upstream 437718 11633509 ~ 11636317 (-)
G32773 NA non-coding upstream 734713 11930504 ~ 11979273 (-)
G32779 NA non-coding upstream 805159 12000950 ~ 12001165 (-)
G32784 NA non-coding upstream 863833 12059624 ~ 12060251 (-)
AMCG00019213 NA other downstream 1743589 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 2275825 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 4493402 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 6191319 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 6237036 4932349 ~ 4940667 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 656317 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 1217363 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 1972645 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 2466325 13662116 ~ 13665230 (-)
G33163 NA other upstream 3296100 14491891 ~ 14558290 (-)

Expression


Co-expression Network