AMCG00019262 (LOC106929367)


Basic Information

Item Value
gene id AMCG00019262
gene name LOC106929367
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11525199 ~ 11535371 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019262
GTCTACCAGGTGGTTGTTGAAGAGGAGCGTCCTCGAAGAGCCAAGAAGGCAGCTGAGATCCTGCGATGTTACCCTGTGCCAATCCACTTCCAGAATGCCTCAGTTTTAAATTCCCAATACTACTTCACTGCTGAGTTCCCGTCTGGTGGCATCCAGTCTCCCCAGCCATTCAGTATTGGTGATAATAAAACCTACAATGGATACTGGAATGTCCCACTTCTTCCTCACAAAAGCTACAGCATTTATTACCAGGCTGTAAGCACAGCAAATGGGGAAACCAAAATCGACTGTGTTAGAGTGGCCACTAAAGCTGCGATAATCGTGACTCAGCTTACAACACCATACATTCGCATCGCCCCAGCTGCTGGCGACGACCAACTAACAGGCGCTGCCACTCGCAAGACTGATACCGTGGAGCCGGAGAAACAGACTGATCACACTGTGAAGATTGCTGGCGTCATCGCTGGCATCCTCCTCTTTGTTATCATCTTCCTGGGAGTCGTGCTGGTTATGAAGAAAAGGTAA

Function

NR:

description
PREDICTED: receptor-type tyrosine-protein phosphatase mu-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019262 True 525 mRNA 0.49 4 11525199 11535371

Neighbor

gene id symbol gene type direction distance location
AMCG00019261 NA coding upstream 47911 11472122 ~ 11477288 (+)
AMCG00019259 NA coding upstream 171093 11353219 ~ 11354106 (+)
AMCG00019255 NA coding upstream 244267 11268008 ~ 11280932 (+)
AMCG00019254 NA coding upstream 437504 11077971 ~ 11087695 (+)
AMCG00019248 NA coding upstream 815767 10701276 ~ 10709432 (+)
AMCG00019264 LOC108432749,LOC108271270,LOC106579657,LOC106590348 coding downstream 18849 11554220 ~ 11567397 (+)
AMCG00019263 LOC108432749 coding downstream 50422 11585793 ~ 11599813 (+)
AMCG00019265 NA coding downstream 71645 11607016 ~ 11612075 (+)
AMCG00019267 NA coding downstream 105137 11640508 ~ 11648448 (+)
AMCG00019260 NA coding downstream 134524 11669895 ~ 11697021 (+)
G32671 NA non-coding upstream 76948 11377956 ~ 11448251 (+)
G32549 LOC103376870 non-coding upstream 1017136 10463163 ~ 10508063 (+)
G32490 NA non-coding upstream 1416049 10108906 ~ 10109150 (+)
G32437 apbb1ip non-coding upstream 1605163 9917320 ~ 9920036 (+)
G32418 NA non-coding upstream 1712562 9809884 ~ 9812637 (+)
G32674 NA non-coding downstream 96987 11632358 ~ 11637880 (+)
G32778 NA non-coding downstream 465592 12000963 ~ 12001164 (+)
G32892 NA non-coding downstream 1074030 12609401 ~ 12612533 (+)
G32893 NA non-coding downstream 1077914 12613285 ~ 12613926 (+)
G33075 LOC104962440 non-coding downstream 1776043 13311414 ~ 13311742 (+)
G32539 NA other upstream 1115702 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 1896537 9369898 ~ 9628662 (+)
G32286 NA other upstream 1985988 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 2176380 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 3140607 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 2903882 14439253 ~ 14486706 (+)
G33283 NA other downstream 3628977 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 4019448 15554819 ~ 15626955 (+)
G33406 NA other downstream 4508571 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 5913949 17449320 ~ 17452659 (+)

Expression


Co-expression Network