AMCG00019264 (LOC108432749,LOC108271270,LOC106579657,LOC106590348)


Basic Information

Item Value
gene id AMCG00019264
gene name LOC108432749,LOC108271270,LOC106579657,LOC106590348
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11554220 ~ 11567397 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019264
GAAACTTGCAAAGAAACGAAAGGAGACATTAAGTAGCACAAGACAAGAGATGACGGTGATGGTTAACTCGATGGACAAGAGCTACACTGAACAGGGCACGAACTGTGATGAAGCTTTCTCGTTCATGGACACGCACAACCTCAATGGAAGAAATGAAAACCACACGATGGTGAGTGACACGAGCAGCCTGGTGCAATCGCACTCCTATAAGAAGAGGGAGCCGGTCGATGTGCCATACCAGACTGGCCAGCTGCACCCAGCCATTCGAGTGGCCGACCTCCTGCAACACATCACCCAGATGAAATGTGCGGAGGGCTATGGCTTCAAAGAGGAGTATGAGaGTTTTTTTGAAGGACAGTCTGCACCTTGGGAATCTGCAAAGAAAGATGAGAACAGAATGAAGAACAGATACGGGAATATCATT

Function

NR:

description
PREDICTED: receptor-type tyrosine-protein phosphatase mu-like isoform X9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019264 True 424 mRNA 0.48 3 11554220 11567397

Neighbor

gene id symbol gene type direction distance location
AMCG00019262 LOC106929367 coding upstream 18849 11525199 ~ 11535371 (+)
AMCG00019261 NA coding upstream 76932 11472122 ~ 11477288 (+)
AMCG00019259 NA coding upstream 200114 11353219 ~ 11354106 (+)
AMCG00019255 NA coding upstream 273288 11268008 ~ 11280932 (+)
AMCG00019254 NA coding upstream 466525 11077971 ~ 11087695 (+)
AMCG00019263 LOC108432749 coding downstream 18396 11585793 ~ 11599813 (+)
AMCG00019265 NA coding downstream 39619 11607016 ~ 11612075 (+)
AMCG00019267 NA coding downstream 73111 11640508 ~ 11648448 (+)
AMCG00019260 NA coding downstream 102498 11669895 ~ 11697021 (+)
AMCG00019271 ndufv2 coding downstream 213004 11780401 ~ 11785241 (+)
G32671 NA non-coding upstream 105969 11377956 ~ 11448251 (+)
G32549 LOC103376870 non-coding upstream 1046157 10463163 ~ 10508063 (+)
G32490 NA non-coding upstream 1445070 10108906 ~ 10109150 (+)
G32437 apbb1ip non-coding upstream 1634184 9917320 ~ 9920036 (+)
G32418 NA non-coding upstream 1741583 9809884 ~ 9812637 (+)
G32674 NA non-coding downstream 64961 11632358 ~ 11637880 (+)
G32778 NA non-coding downstream 433566 12000963 ~ 12001164 (+)
G32892 NA non-coding downstream 1042004 12609401 ~ 12612533 (+)
G32893 NA non-coding downstream 1045888 12613285 ~ 12613926 (+)
G33075 LOC104962440 non-coding downstream 1744017 13311414 ~ 13311742 (+)
G32539 NA other upstream 1144723 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 1925558 9369898 ~ 9628662 (+)
G32286 NA other upstream 2015009 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 2205401 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 3169628 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 2871856 14439253 ~ 14486706 (+)
G33283 NA other downstream 3596951 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 3987422 15554819 ~ 15626955 (+)
G33406 NA other downstream 4476545 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 5881923 17449320 ~ 17452659 (+)

Expression


Co-expression Network