AMCG00019265


Basic Information

Item Value
gene id AMCG00019265
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11607016 ~ 11612075 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019265
GGTGGAACAAGGAGTCTGTACTAAGACATATTTGGTCTGCATTGAGTCACAGTGATCACTGTGTTTTGACTAGGTGGAAAATGGAGCAGTCACCATCTCAGTCTTGGATCTCATTTGTGAATTCTCTGGGACCTAATAACTACAAAAAAACTGTCAGGGTGGTGTCTGGGAATTATCTATCAGgagaatttcaaatatttccagATGAGCATCCATACCTGTCAGTTGCAGAACTTTATTACTCTGTTCAAATAGGAGCACTGGGAGGGGAAGGAACTCGATTTGAgaacaaaaaatctatttatctGGAGGATAAAACTGTCATCGATAAAGGAGAGATTTTAGAATTAGTTGGTTTGGAAGAAAAAGACAGCACATTTCTAAAATTCAGTCTGCTTAAAGAAGATACTTCTCCTTTTGTTCTTTTGCCGCTGACCTGCAATGTGGAGCTGCAGGAATGTCATGATGACCAATTCTATACTTTGGATATGATTCTACAGTGGAAAATGCTGTTTGGGCGAAAACGCTTtgtgaaaataacaaaaggaCACAGTCTGCCATGTTTACAGCACTTCAGGGGTGTGGCTCACCTCTCACCAACATACTCCTTTAAAGTTGTTTGTTCAGgtGGAACAGAGACCATTGTTGCTTCAGACTTGGACATTGAAGTAATTGAGGTATCTGGAAAAGACTGGATTCTTAATTTTACGATGACTTTAAACATGATCTACAGAATTCCAGTAAATGAATTTCCTATCGAAGTCACAGTCTCAAAAGTTTCTTCAGAAATAAACACCACCAGTGGATTCCGAAACTTAGAAGTTGGCCAATGCTTGACcatactgaaaaagaaagaaattaaaaaatgcatagtGACAGAGTCTGCCAAACAACATTTCCTTGTGCCATCAACATACCAAGGAACCATAGTGAAAACTCCCAGAAGCTTCCCCTTTGCTTTTGACCTGTTCTGCAGCAGAACCAAAGAACAGGGGATCAGAGTACTTGTGAGGAAAGCGTACAAGGCTGAAGTACCGCTTTTATCTTCTTTGGAGGTTGGCGATGAGCTACAGGTCTTGACATCTAGAACAGTTGTGTTGGAACAAAATGCAAGACCTCAAGAGTTGGAGGTTGTTGAGTGTGTCAATGTAAAtacaaaccaaaccatcaacattccCTTGTATGCTGAGGGGCAGTTTTTAGAAATCCTAGGAGAGAGCCAAGTCTGTACTTTAGCAGAACTCCTCTCACAACCGCATTCTGTGCCCTGCAACATCATGGTGGTCAAGGCAGACCCTTCTGTGGAATCTGACCCATTGCCTGGCCTAAAGGAACTAAGACTGGAGATGGAAATATCGGACCCCTGTCTCATAGCTTTACGCAGAGACCCCTCTCCTGTTATTTTGGCACTTCCAATAGACAGGGTCAAAGTCTCGATAGAAGCTCCTCAAGAAATCCCACCAAGGATTCTAAACACTGCAACTCTGTATACAGCACAGATTGAACCCAAGCAAAAAGTGGAAACGCATCACAAGCAG

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019265 True 1538 mRNA 0.42 4 11607016 11612075

Neighbor

gene id symbol gene type direction distance location
AMCG00019263 LOC108432749 coding upstream 7203 11585793 ~ 11599813 (+)
AMCG00019264 LOC108432749,LOC108271270,LOC106579657,LOC106590348 coding upstream 39619 11554220 ~ 11567397 (+)
AMCG00019262 LOC106929367 coding upstream 71645 11525199 ~ 11535371 (+)
AMCG00019261 NA coding upstream 129728 11472122 ~ 11477288 (+)
AMCG00019259 NA coding upstream 252910 11353219 ~ 11354106 (+)
AMCG00019267 NA coding downstream 28433 11640508 ~ 11648448 (+)
AMCG00019260 NA coding downstream 57820 11669895 ~ 11697021 (+)
AMCG00019271 ndufv2 coding downstream 168326 11780401 ~ 11785241 (+)
AMCG00019269 ankrd12 coding downstream 208948 11821023 ~ 11838760 (+)
AMCG00019270 LOC106579643,LOC108432738,LOC108271222,LOC103038715 coding downstream 229068 11841143 ~ 11853279 (+)
G32671 NA non-coding upstream 158765 11377956 ~ 11448251 (+)
G32549 LOC103376870 non-coding upstream 1098953 10463163 ~ 10508063 (+)
G32490 NA non-coding upstream 1497866 10108906 ~ 10109150 (+)
G32437 apbb1ip non-coding upstream 1686980 9917320 ~ 9920036 (+)
G32418 NA non-coding upstream 1794379 9809884 ~ 9812637 (+)
G32674 NA non-coding downstream 20283 11632358 ~ 11637880 (+)
G32778 NA non-coding downstream 388888 12000963 ~ 12001164 (+)
G32892 NA non-coding downstream 997326 12609401 ~ 12612533 (+)
G32893 NA non-coding downstream 1001210 12613285 ~ 12613926 (+)
G33075 LOC104962440 non-coding downstream 1699339 13311414 ~ 13311742 (+)
G32539 NA other upstream 1197519 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 1978354 9369898 ~ 9628662 (+)
G32286 NA other upstream 2067805 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 2258197 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 3222424 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 2827178 14439253 ~ 14486706 (+)
G33283 NA other downstream 3552273 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 3942744 15554819 ~ 15626955 (+)
G33406 NA other downstream 4431867 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 5837245 17449320 ~ 17452659 (+)

Expression


Co-expression Network