AMCG00019269 (ankrd12)


Basic Information

Item Value
gene id AMCG00019269
gene name ankrd12
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11821023 ~ 11838760 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019269
ccaggtaCATAATGAAAAGGCTGATGTGTAAGTGCTGCAGCTAGTTAAGAGCTGTAAAATGGCCAAACCTGGGACTGACAGAGACGGCACCATGGTAGAAAAACAATCAGGAAAGAAGAGCAAGGATAAAATTTCCCCATTCACCAAGACTCCCAAGCTGGATCGAAGTGAGCTCCTGGGGAAGGAAATGAAACCGAAGTCTTCCATGAAACGCAAACTTCCTTTCACTGTCAGTCCCCCAAGGCACGAGGAAAGGGACTCGGACACAGATTCAGAGCCAGGACACACGAGTGAAACCTGGGGAGAAAGATTAATCCCTCCTTACAGGATTTACTCAGATAAAGACGGTCCAGACAAGAAGAAAGTAAAGAAGGAAACGGGAAGCAAAAAGTCAACCCCTGTCAACATATTTGGATATCCACTGTCCGAACGAAAGCAGATGGCCCTTCTCATGCAAATGACAGCAAGAGACAACAGTCCAGACACTACTCCTAATCATCCATCCCAGGCAACACCAGTCCAAAAGAAAATACCAAGCACCTCCTCAAGGCAAAAAGATAAAGTCAATAAGAGaaatgagagaggagagacaccGTTACACATGGCTGCCATTAGGGGCGATGCCAAGCAAGTTAAGGAGCTCATCAGTCTCGGTGCGGATGTCAATGTTAAAGACTTTGCAGGATGGACTCCACTGCATGAAGCGTGTAACCTGGGTTACTACGATGTTGCCAAAGTCCTGATTGCAGCAGGAGCTGAAGTGAACACACAGGGGCTAGATGATGACACACCATTGCATGATGCTTCAAGCAGTGGGCACAAGGATATTGTCAAGTTGCTGTTGCGTCATGGTGGCAATGCCTTCCAAGCAAATAACCGTGGGGAACGTCCTGTGGATGTTGCAGACTCAAAGGAACTGGAGCAGCTGCTCAAGGGAGAGATGCCACTCTCTGATGAGGAAGACAGCTCCTCAGAATCTGAAGACCCTCTCTCAATAAACCCTTCCAGCGTTGATGATAATATGGAGTACTCTGATGCGGAAAAGGACTCTGACAGCAAACAACCTCATCCAAACAAAGCACCTCCCTGTGTATCTGGTTTGGATGAGTACGAGTTCAAGgacgaagaggaggaggaagacttGAGCAAAGCACTGAATGATAGGCATATCCTAAGGAGAGAACTCCGGCAGcgagagaaggaagaaaaagagagaaataatgtCATGGCTAAGCATGAAAAGAATGATCAGCCAAGTGTCTGCAAGTCAAAAAAGCAGAAACCCTCCCGTATCCCGTTGTTCTGCAGCTCTGAGAGTTCAGGAGACGAGACGCCGCAGGAGAAAAAAATCTCTTCTCCTACGTGTTCCCTTGCGGCTGCTGCAGAGTGTCACAAAACTGAAGTAAGGACTAAGAAAGAATTAAGCCTTGCAGCAGAGCATAAAGAGAAAGgtaaagtgaagaaaaagtttaaaaatcaaagtaaaaacaaggaaaaccaAGAACTTAAGgaagatggaaaagaaaacagtaaaGTTACGTTTTTCTCCTCAGCACCAGTGCTGGAAACATCGGAGAGGACGAGAGAGGAAGactcatttaaaatgtctttcagcCCAAAGGATGACTCTTCTGTTCATCTTTTCCATCTTCCATCAGTAAAGTCTCCAAAACTCAATCACAGTTTAGCAGACAAGCAGTCTGCACCACTAAAACAGGAGAATGCTAAAATGTGCTTGTCCACAGGAGTCCCTGAAAGTCCTTTGCAAGTGGATACTGTCAAATATGACCATTATGCAGAAGCTGACAATACCACAGAGAGCTCAAGCAGCAAAGGTTTTAAGCAcaaagagaaaagcaaacatCACCAGAAAGACAGTAGCATAGATGTGGAAGATGAGAACTCAAGTTCATGCAAAGATGACAATCTGGGCACTAGCTtagacagctcagagggtgccTTACGGAAGACTGATAAAGAGGGGAAAGtagtaaaaaaacacaaattaaaacacaaggaaaaagacaaacacagaagGGAGTATgatggagaaaaagaaaagcataggCAGAGAGACCTGAAGAAGGAGGGGCACAGGAACCTAGAGTTTGACAGGGAGTTTTGGAAAGAGAACTTTTTCAAGAGTGATGAAAATGACGAGCCTTTGCTAGGTAAAACTGAAACCTCTGAGACGGGTACCCCACAAAAAATAACTGAGATGTTACCTATTAAAGAGGAGAGAGCTGTTAAAGACAAACATGTCAGCAAAGACAAGAGACCTAAAGAGGATCGGGAAAAAGATAAAGTTccaaaaaaggagaaaaaagagaaCCTATGCAGGGAAGAAAAGGggaaagaattaaaaacaagtgaACAAGAGGAGAGAACAGACAGTCTTGTCTCAGAAAGGGCTCCTGAGGAAACTTTATATGGTGTTGCTGCCATAAAAGAAGAACAGGATGAGCAGTTCTCAACTGAGAAAGAAACTGATCACGACCAGCATGATCCGCAGGAAAAAGGAGCACgagaaaaaaatgagaaaaggtCTCCAGCAAAGGAAAAGGACACGGACAAGCTGGATAAAAAGCATTctgacaaagaaaagaaagtcaAATCTGAGCACAATTTCTCAGACAAACCAGAATCCCATAATTGCACAGacaagtggagagagagagaaaagacaagCTCCTCTCATTCATGTGGAGAGAGAACCCACAAGGAAAGTGACAAGATGAAGCCTATTTTATCAATGAAAAAACCTGACGAGAACAAGAGAAGCAAAGACAAGCTTGAGAGGaagcatgaaaaagaaaagcaagaaaaagaaCGGTCTATGGGGGAGAGCAAGGACAAAGAGAAAATTGGTACAGACAAGAAAGGAAAGGTATCAGAAAAAGGAGTGGATTTAAGTAAGCCTGATCGATATAAAGAAAAGGATAAAGaacatgaaaagaagaaaaaagataaaataaaagatgTTACCTCCAGTTCAAACTTAAAAATtcaagaggagaaaaaaagcaGTGTGTTGGAAACCAGTAAGGTATACCATGACAAGGCATTATCTTCAAAACTGAAAGATGATGGTCTGAAAACCCCAGAAAAAGACAGAAGGGAAAATGATCGAGATATTGAGCGGTACAAGGAAAGGGATAAGTATAAGGATAAATCTCAGCCACCTAAagccaacaaaacaaagacaaatgagTTGGAGGCTGATAAGGCTAAATCAAAGCCACTGTCTGCTCCCAAGGATACCCGACCTAAAGAGAAAAGGCTTGTGAATGATGATCTCATGCAGACCAGTTTTGAGAGGATGTTGAGTCTGAAAGATCAAGAGATAGAACAGCGACATcggaaacacaaagaaaaaattaaGCAAAAGGAAAGGGAAAGGATGAGACACAAACCAGGATCAGACCTCAACAAACTGAAGAACAAAGACAGGTTGAGAAACTCACCGGCTGAACTAAGCAACAGCAAAGAGCTTCTAAGGTCCAAAAGCTCAGAGGTCTCTGAAACACTCACTCGGGAGAAGACATTAAAAGAGGCTACTGGGGCAAGATCATTTTCCTTGGATGCAAAGAATCTGCCAAATGCTGGAAAAATTGGCTTTGGTTTGGAGAACAGTTTGACTCGTTCCCCTAagccagaaaatgaaaaatcgGGTCTTATATCCAGATCTGTGTCCATGATATCGGTAGCTAGCTCAGAGGATTCCTGCCAGGCTGCAGTGATGACACCAAGGCCAATGACAGAGTATGATTCAGATTTTACTCTTGAGGGTTCAGACTCCCAGTTGTCATTCTCACAGGCACTGTCAGTGACGCATTCCAAATCTCCTGTTATTACTGACAGAGAAACCGAAGGGTTATTTGACGTGACGCAGCGAGGCAAGACTTCGCTGCCTAGCAAGCAGCCTCCCCCTTACCTGAGGTCACCATCGGCTGAAGATCCTAAACCTTCAGCTCCTGATGGCAGAGTGTTGGTGGAGGATCGGAGGTATAGTGCCCCAGCAGACTCAAGCAGTGAGCATTTACGAAGTTCTCTGTCTGAGAGTAATTTGCCCCCTACACAAGAGAACCAGAACAGTCCCTGTCCAGCACCCCCAAGCCTTAGCAATACCAGTTCTATGTCAGAAGCTCCTCTAGACATTGGTGGTGAAGGAATCCCGTGCAGTAGTAGCTCAAGCACTCACCATTCCCTTTCTGTGTCTCCTCTTCCTGTGCCAAACAGCAGTGATTCTAGATCAGTGGACTCTGATGAGACAACTGGTTCTCAGAATATAAATCCTGTGGAACCAGATTGCATACAGCAGACTGCTCAAGAAATGGAAAGGCCTTATAATGCTGAACTCCTGCCAGATAAGGATACGACCTGTCCACTAACACATGACTCCCAAATTGAAAACTCAAGTGAGAAATTAACGTCTGATTGTCCAAAAACGGATTGCAAGTATTTTCCATCTGTGAATGCACCAGGAATGTTATCAACTTCTCTGCCTGCTCAACGGACTCTTTCTTCAAGTTTAAAAGCATCTTCTGATAGCAGTAGTGAACATCAAGATATCAGGGAGATGGAGTCAAGCAGTCTTAACTTTGAGATACTGCAAAAGGCTGAAAAGGATCCAGTGGTGGTTGCTGAACAAGAAGACCAGCCTAAATTGATTGAGGATTCTCATTCCAGTACAGATGGCAAACTGGAGGAACAGAAGACAGAAAATGCAACAAGTGATGTATCTGCAAATCTCAGAGCAGATTGTAATAATAGCCCAGGGCAACTTGCACCATCTTGTACCATTATACAGCGAATAGGCAATAACGCCACAGATAACCCTACCATGAATGCGAATACAATCTGTGAGGAAGTCAAGGACATCCAAGAAGACATGGAGACGGATCCTTCAAGTACAAAGGACACTAAAGCAAGGTCTGGAAATGAATCTGTGAATGACAGCTCACGTGATCAACAGTTAGGCCAACCTGAATCTGATCTTCCTAAGTCATTACCCACCTTGGAAACTCATTGTCCAGATCCTGAGCAGAAATCAGAGGAAACTACAGAAACTGCAGGTAGCTTAGAGAATTCATCAGAGGTAGCCGAGAGAGCACAAactacaaataacacaaaacaaacaaagagtgTACTAGAAGTGAAAACTGAACCAGTGGAAGAGATGAACGTAGATCAGGAAACTGTTCAAGAGAAAGAACAACAGCAGGATGAATCGCAAAGAACAGCCAACATCCAGGAAAATTCCCAAGCATGCCCTAATAAAGTTACTTCTGCAAGTTGTCCCCAGACTGGTGATAAAGATCTAGACATTTCTGGTGCCATTAAGGCAAAAGTAAGGTTAAGTGAAGATGAGGATATGCAAGTGCATCACCCTCGAAAGAGAAAGATGCTGAGAGTGCCCCAGCCTGTTCAAGCAAACCCAGTGCTTCAGCAAGCTAAAGAAAAGACCCAGCAATCTCTAGCGGCTATCGTAGACTCTCTGAAGCTGGACGAGATTCAGCCTTACCAGACGGAGAGAGCAAACCCCTACTATGAGTTCCTGCACATCCGGAAGAAGATCGAAGAGAAGCGGAAAGTGTTATGCAGTGTTATCCCCCAAGCACCACAGTATTATGATGAATACGTGACCTTCAATGGATCGTACCTTCTTGATGGAAATCCTCTCAGTAAGCTATGTATACCAACTataactcCACCTCCCTCTTTACCTGAACTACTGAAAGAGCTTTTTAAACAACAAGAGGTTGTCAGAATGAAGTTGCGGTTACAACATAGTATTGAACGGgAGAAGCTGATCGTTTCCAATGAGCAGGAGGTGTTGCGTGTCCATTACCGTGCAGCAAGAACACTAGCTAACCAGACTCTACCATTTAGTGCCTGCACTGTCCTCCTGGATGCTGAGGTTTATAACATGCCCCAGGAAGCCCAGGCTGATGATGGCAAAACATCCGTCCGAGACCGGTTTAATGCCCGGCAGTTCATGTCATGGTTGCATGATGTGGATGACAAGTTTGATAAACTTAAGaCGTGTCTTCTAATGAGGCAGCAGCACGAGGCAGCAGCATTGAATGCTGTACAGCGACTAGAATGGCAGCTCAAATTACAAGAACTTGACCCCGCAACATACAAGTCTATCAGTATCTTCGAGATACCAGAGTTTTATGTCCCCCTGGTTGATGTCAATGATGACTTTGAATTGACACCGATATGATGTCTGCTTTGTGCAGTGGAGTTGAAGTCCAAGGTATCTGTGCCAGCTTGGTATGAAGTATATTGCACTTAATATACAAGGTTGTAGAATGCATCGCAACTTTCCATTCCAGAGCTCTTACAAAAGTCCAGAAGGCCGATTTCTTCTTGCAGATAAAAGACAATGTGTGTAACTGGTGCAGAGCTGCAAACAGGCATCACTGTCACCATTACACAGTGTAAGAGCTGGTGAGGGAACAGTTCAAAGGGGTGGTTATACGTGTTAGCTCATCTAATAAGTGAATGGAGTTGTGGCTTGCACAGGAACGGCACTTATCACAAGATACAGAAATATTGAGCTTGCAGCGCTGGAAGCTGCGAAATGACAGCAAAGAAGAGTGTACCAAGGAAAAGAAGGAGCATGGTAGATGCCCACAATACCCTCGGCTGTGCAGAATACTTCTCCCAGTAAGAACCGTGCGGTCACTAATGTTCTTGCTGAAAAgaactataaattaaaaatgctaaATCACTTCTAAGTGAGTGTTCATAAATGTACAGACGTgctcttaattttttaataacttattttatacatactgattgtgcatttgtaaatagtcatgtaattattgtttttaacttgtaaaaaaaattaaaagatagATATTTTGattgtaaacatgttttgtctAATGTTTTAATGGACCAAAGTTGAGGTTTTATATTGAGTGTCCTGTTGTTGTTGGCTAATTCTAAAGcatgtttgacttttttttacatgttcCATACCTGCAGATGTTTTAGATGTGTGATATTAATGCTGTGCATGCATTACTGTACCGGTTTTTACTCTTTCTACAACTGTACTGTGGATTGTAGTGAGGTTTACTCAACTGTTCCATGCTTATTGTTCTGCCATGTGCATCACGGTGTGTGGCTCCAttctcatttttgtttgttgaatcgcataaaaaaagaaaaatgttcaattttccttaaacaaagaaaaatgttacttttacaGTTTGATGTGAAATCacaacaaaaactattttttcaacataatgCCTTTGGACGATGGttctaaaattatatattgtctattttaatattttcttgttaaatgatgtgtacatatttgtaatatataattgaataaatttTATTGTCAGTGCATTCCAAAAGATGTTTTGAATTTCCATTCCAGCTACTTATCTTTACCAGAAAAAGAGAAACCGAAACGGTC

Function

symbol description
ankrd12 Is expressed in central nervous system; eye; and telencephalon. Orthologous to human ANKRD12 (ankyrin repeat domain 12).

NR:

description
ankyrin repeat domain-containing protein 12 isoform X1

GO: NA

KEGG:

id description
K21436 ANKRD11_12; ankyrin repeat domain-containing protein 11/12

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019269 True 7456 mRNA 0.42 12 11821023 11838760

Neighbor

gene id symbol gene type direction distance location
AMCG00019271 ndufv2 coding upstream 35782 11780401 ~ 11785241 (+)
AMCG00019260 NA coding upstream 124002 11669895 ~ 11697021 (+)
AMCG00019267 NA coding upstream 172575 11640508 ~ 11648448 (+)
AMCG00019265 NA coding upstream 208948 11607016 ~ 11612075 (+)
AMCG00019263 LOC108432749 coding upstream 221210 11585793 ~ 11599813 (+)
AMCG00019270 LOC106579643,LOC108432738,LOC108271222,LOC103038715 coding downstream 2383 11841143 ~ 11853279 (+)
AMCG00019268 ralbp1,LOC107667860 coding downstream 22116 11860876 ~ 11867010 (+)
AMCG00019273 LOC107750901 coding downstream 49245 11888005 ~ 11901076 (+)
AMCG00019274 vapa,LOC102777368 coding downstream 86005 11924765 ~ 11930683 (+)
AMCG00019275 napg,LOC108271818,LOC106590336,LOC108431250 coding downstream 223662 12062422 ~ 12067044 (+)
G32674 NA non-coding upstream 183143 11632358 ~ 11637880 (+)
G32671 NA non-coding upstream 372772 11377956 ~ 11448251 (+)
G32549 LOC103376870 non-coding upstream 1312960 10463163 ~ 10508063 (+)
G32490 NA non-coding upstream 1711873 10108906 ~ 10109150 (+)
G32437 apbb1ip non-coding upstream 1900987 9917320 ~ 9920036 (+)
G32778 NA non-coding downstream 162203 12000963 ~ 12001164 (+)
G32892 NA non-coding downstream 770641 12609401 ~ 12612533 (+)
G32893 NA non-coding downstream 774525 12613285 ~ 12613926 (+)
G33075 LOC104962440 non-coding downstream 1472654 13311414 ~ 13311742 (+)
G33093 NA non-coding downstream 1794942 13633702 ~ 13638171 (+)
G32539 NA other upstream 1411526 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 2192361 9369898 ~ 9628662 (+)
G32286 NA other upstream 2281812 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 2472204 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 3436431 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 2600493 14439253 ~ 14486706 (+)
G33283 NA other downstream 3325588 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 3716059 15554819 ~ 15626955 (+)
G33406 NA other downstream 4205182 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 5610560 17449320 ~ 17452659 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016948 NA non-coding NC_007113.7 CM002886.2 54783824 ~ 54787578 (-)
grasscarp (Ctenopharyngodon idella) G288793 NA non-coding CI01000075 null 474588 ~ 479486 (+)
striped catfish (Pangasianodon hypophthalmus) LOC117599564 LOC108279645,LOC108274854 non-coding NC_047612.1 CM018558.1 4443316 ~ 4451312 (+)